Information for 1-ACAGCGCAGGGGA (Motif 2)

T C G A A G T C C G T A A C T G A G T C A C T G A G T C C G T A A C T G A C T G A C T G A C T G T C G A
Reverse Opposite:
A C G T A G T C A G T C A G T C A G T C A C G T A C T G A G T C A C T G A G T C A C G T A C T G A C G T
p-value:1e-11
log p-value:-2.564e+01
Information Content per bp:1.916
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.0 +/- 18.9bp
Average Position of motif in Background66.9 +/- 2.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ACAGCGCAGGGGA
-CACAGCAGGGGG
 T C G A A G T C C G T A A C T G A G T C A C T G A G T C C G T A A C T G A C T G A C T G A C T G T C G A
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

NRF1/MA0506.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ACAGCGCAGGGGA
--TGCGCAGGCGC
 T C G A A G T C C G T A A C T G A G T C A C T G A G T C C G T A A C T G A C T G A C T G A C T G T C G A
A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACAGCGCAGGGGA-
GCCGCGCAGTGCGT
 T C G A A G T C C G T A A C T G A G T C A C T G A G T C C G T A A C T G A C T G A C T G A C T G T C G A A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ACAGCGCAGGGGA
-CTGCGCATGCGC
 T C G A A G T C C G T A A C T G A G T C A C T G A G T C C G T A A C T G A C T G A C T G A C T G T C G A
A C G T A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

ZIC1/MA0696.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ACAGCGCAGGGGA--
-CACAGCGGGGGGTC
 T C G A A G T C C G T A A C T G A G T C A C T G A G T C C G T A A C T G A C T G A C T G A C T G T C G A A C G T A C G T
A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

GLIS2/MA0736.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ACAGCGCAGGGGA--
-CTTCGCGGGGGGTC
 T C G A A G T C C G T A A C T G A G T C A C T G A G T C C G T A A C T G A C T G A C T G A C T G T C G A A C G T A C G T
A C G T T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ACAGCGCAGGGGA--
---SDGCAGGTGCNS
 T C G A A G T C C G T A A C T G A G T C A C T G A G T C C G T A A C T G A C T G A C T G A C T G T C G A A C G T A C G T
A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACAGCGCAGGGGA--
DCHCAGCAGGRGGCC
 T C G A A G T C C G T A A C T G A G T C A C T G A G T C C G T A A C T G A C T G A C T G A C T G T C G A A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZIC3/MA0697.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACAGCGCAGGGGA--
NCGCAGCGGGGGGTC
 T C G A A G T C C G T A A C T G A G T C A C T G A G T C C G T A A C T G A C T G A C T G A C T G T C G A A C G T A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

ZIC4/MA0751.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACAGCGCAGGGGA--
NCNCAGCGGGGGGTC
 T C G A A G T C C G T A A C T G A G T C A C T G A G T C C G T A A C T G A C T G A C T G A C T G T C G A A C G T A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C