Information for 7-GGCAAAAAGCCGC (Motif 19)

A C T G A C T G A G T C C T G A C T G A C G T A C G T A C G T A A C T G A G T C G T A C A C T G A T G C
Reverse Opposite:
A T C G G T A C A C T G A C T G A G T C C G A T A C G T A C G T A G C T A G C T C T A G A G T C G T A C
p-value:1e-8
log p-value:-1.922e+01
Information Content per bp:1.881
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.2 +/- 25.0bp
Average Position of motif in Background38.7 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)2.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GGCAAAAAGCCGC
CAATTGCAAAAATAT--
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C C T G A C T G A C G T A C G T A C G T A A C T G A G T C G T A C A C T G A T G C
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T

E2F2/MA0864.1/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GGCAAAAAGCCGC------
---AAAATGGCGCCATTTT
 A C T G A C T G A G T C C T G A C T G A C G T A C G T A C G T A A C T G A G T C G T A C A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGCAAAAAGCCGC
GGAACAAAGR---
 A C T G A C T G A G T C C T G A C T G A C G T A C G T A C G T A A C T G A G T C G T A C A C T G A T G C
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGCAAAAAGCCGC-
TTGGCANNNTGCCAAG
 A C G T A C G T A C T G A C T G A G T C C T G A C T G A C G T A C G T A C G T A A C T G A G T C G T A C A C T G A T G C A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGCAAAAAGCCGC---
-AGCAACAGCCGCACC
 A C T G A C T G A G T C C T G A C T G A C G T A C G T A C G T A A C T G A G T C G T A C A C T G A T G C A C G T A C G T A C G T
A C G T T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGCAAAAAGCCGC
CTGGCAGNCTGCCA-
 A C G T A C G T A C T G A C T G A G T C C T G A C T G A C G T A C G T A C G T A A C T G A G T C G T A C A C T G A T G C
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGCAAAAAGCCGC
TGGCACCATGCCAA
 A C G T A C T G A C T G A G T C C T G A C T G A C G T A C G T A C G T A A C T G A G T C G T A C A C T G A T G C
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

E2F3/MA0469.2/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGCAAAAAGCCGC-------
--AAAAATGGCGCCATTTTT
 A C T G A C T G A G T C C T G A C T G A C G T A C G T A C G T A A C T G A G T C G T A C A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GGCAAAAAGCCGC
ARGAGGMCAAAATGW---
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C T G A C T G A C G T A C G T A C G T A A C T G A G T C G T A C A C T G A T G C
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGCAAAAAGCCGC
VRRACAAWGG---
 A C T G A C T G A G T C C T G A C T G A C G T A C G T A C G T A A C T G A G T C G T A C A C T G A T G C
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T