Information for 6-GAAGGCCTCA (Motif 18)

A T C G C T G A C T G A A C T G C T A G A T G C A G T C A G C T A T G C G C T A
Reverse Opposite:
C G A T A T C G T C G A A C T G A T C G A G T C A G T C A G C T A G C T A T G C
p-value:1e-8
log p-value:-1.987e+01
Information Content per bp:1.840
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.62%
Number of Background Sequences with motif284.0
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets45.2 +/- 24.9bp
Average Position of motif in Background48.5 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GAAGGCCTCA
CNAGGCCT--
 A T C G C T G A C T G A A C T G C T A G A T G C A G T C A G C T A T G C G C T A
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GAAGGCCTCA
CTAGGCCT--
 A T C G C T G A C T G A A C T G C T A G A T G C A G T C A G C T A T G C G C T A
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GAAGGCCTCA-----
-CAGGCCNNGGCCNN
 A T C G C T G A C T G A A C T G C T A G A T G C A G T C A G C T A T G C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAAGGCCTCA
GTGGGCCCCA
 A T C G C T G A C T G A A C T G C T A G A T G C A G T C A G C T A T G C G C T A
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAAGGCCTCA
NGAAGC-----
 A C G T A T C G C T G A C T G A A C T G C T A G A T G C A G T C A G C T A T G C G C T A
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAAGGCCTCA
CAAGGHCANV
 A T C G C T G A C T G A A C T G C T A G A T G C A G T C A G C T A T G C G C T A
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAAGGCCTCA
-AAGGTCAC-
 A T C G C T G A C T G A A C T G C T A G A T G C A G T C A G C T A T G C G C T A
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAAGGCCTCA
NTCAAGGTCA--
 A C G T A C G T A T C G C T G A C T G A A C T G C T A G A T G C A G T C A G C T A T G C G C T A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAAGGCCTCA
BTCAAGGTCA--
 A C G T A C G T A T C G C T G A C T G A A C T G C T A G A T G C A G T C A G C T A T G C G C T A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAAGGCCTCA--
TAAGGCGTCTTG
 A T C G C T G A C T G A A C T G C T A G A T G C A G T C A G C T A T G C G C T A A C G T A C G T
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G