Information for 4-CAAAAAAGGGCTCCAA (Motif 6)

A G T C C T G A C G T A G T C A G C T A C G T A G T C A C T A G A C T G C A T G A T G C A C G T A G T C A G T C C G T A T C G A
Reverse Opposite:
A G C T G C A T A C T G A C T G C G T A A T C G G A T C A G T C G A T C A C G T G A C T C A G T A C G T A C G T G A C T A C T G
p-value:1e-14
log p-value:-3.358e+01
Information Content per bp:1.674
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif23.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets48.2 +/- 23.9bp
Average Position of motif in Background49.2 +/- 36.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F3/MA0469.2/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CAAAAAAGGGCTCCAA----
--AAAAATGGCGCCATTTTT
 A G T C C T G A C G T A G T C A G C T A C G T A G T C A C T A G A C T G C A T G A T G C A C G T A G T C A G T C C G T A T C G A A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

E2F2/MA0864.1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CAAAAAAGGGCTCCAA---
---AAAATGGCGCCATTTT
 A G T C C T G A C G T A G T C A G C T A C G T A G T C A C T A G A C T G C A T G A T G C A C G T A G T C A G T C C G T A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.55
Offset:9
Orientation:forward strand
Alignment:CAAAAAAGGGCTCCAA
---------GCTCCG-
 A G T C C T G A C G T A G T C A G C T A C G T A G T C A C T A G A C T G C A T G A T G C A C G T A G T C A G T C C G T A T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

E2F1/MA0024.3/Jaspar

Match Rank:4
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CAAAAAAGGGCTCCAA-
-----TTTGGCGCCAAA
 A G T C C T G A C G T A G T C A G C T A C G T A G T C A C T A G A C T G C A T G A T G C A C G T A G T C A G T C C G T A T C G A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CAAAAAAGGGCTCCAA
GAAAAAATTGCAAGG-
 A G T C C T G A C G T A G T C A G C T A C G T A G T C A C T A G A C T G C A T G A T G C A C G T A G T C A G T C C G T A T C G A
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:6
Score:0.49
Offset:-6
Orientation:forward strand
Alignment:------CAAAAAAGGGCTCCAA
CAATTGCAAAAATAT-------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A C G T A G T C A G C T A C G T A G T C A C T A G A C T G C A T G A T G C A C G T A G T C A G T C C G T A T C G A
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CAAAAAAGGGCTCCAA
--ACAAAGGNBCCT--
 A G T C C T G A C G T A G T C A G C T A C G T A G T C A C T A G A C T G C A T G A T G C A C G T A G T C A G T C C G T A T C G A
A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:CAAAAAAGGGCTCCAA----
--------GGCTCYAKCAYC
 A G T C C T G A C G T A G T C A G C T A C G T A G T C A C T A G A C T G C A T G A T G C A C G T A G T C A G T C C G T A T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CAAAAAAGGGCTCCAA
CCATATATGG-------
 A C G T A G T C C T G A C G T A G T C A G C T A C G T A G T C A C T A G A C T G C A T G A T G C A C G T A G T C A G T C C G T A T C G A
G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.48
Offset:1
Orientation:forward strand
Alignment:CAAAAAAGGGCTCCAA
-ATAAAGGCGCGCGAT
 A G T C C T G A C G T A G T C A G C T A C G T A G T C A C T A G A C T G C A T G A T G C A C G T A G T C A G T C C G T A T C G A
A C G T C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T