Information for 3-ATGTCTGGACGHGGHA (Motif 3)

C G T A A C G T A C T G A G C T A G T C G C A T A C T G A C T G C T G A A G T C A T C G G A T C A C T G A C T G G A T C C G T A
Reverse Opposite:
A C G T C T A G A G T C A G T C C T A G A T G C A C T G G A C T A G T C A G T C C G T A A C T G C T G A A G T C C G T A C G A T
p-value:1e-29
log p-value:-6.743e+01
Information Content per bp:1.818
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.7 +/- 15.9bp
Average Position of motif in Background18.5 +/- 4.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----ATGTCTGGACGHGGHA
NNTNNTGTCTGGNNTNG---
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G C T A G T C G C A T A C T G A C T G C T G A A G T C A T C G G A T C A C T G A C T G G A T C C G T A
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATGTCTGGACGHGGHA
-TGTCTAGACG-----
 C G T A A C G T A C T G A G C T A G T C G C A T A C T G A C T G C T G A A G T C A T C G G A T C A C T G A C T G G A T C C G T A
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ATGTCTGGACGHGGHA
ATGCCCGGGCATGT--
 C G T A A C G T A C T G A G C T A G T C G C A T A C T G A C T G C T G A A G T C A T C G G A T C A C T G A C T G G A T C C G T A
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATGTCTGGACGHGGHA
CTGTCTGG--------
 C G T A A C G T A C T G A G C T A G T C G C A T A C T G A C T G C T G A A G T C A T C G G A T C A C T G A C T G G A T C C G T A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:5
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----ATGTCTGGACGHGGHA
NGGGCATGTCTGGGCATGTT-
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G C T A G T C G C A T A C T G A C T G C T G A A G T C A T C G G A T C A C T G A C T G G A T C C G T A
G T C A C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C A C G T

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----ATGTCTGGACGHGGHA
NGGGCATGTCTGGGCATGTT-
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G C T A G T C G C A T A C T G A C T G C T G A A G T C A T C G G A T C A C T G A C T G G A T C C G T A
G T C A C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATGTCTGGACGHGGHA
VBSYGTCTGG--------
 A C G T A C G T C G T A A C G T A C T G A G C T A G T C G C A T A C T G A C T G C T G A A G T C A T C G G A T C A C T G A C T G G A T C C G T A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TP73/MA0861.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ATGTCTGGACGHGGHA
GACATGTCTGGACATGTC-
 A C G T A C G T A C G T C G T A A C G T A C T G A G C T A G T C G C A T A C T G A C T G C T G A A G T C A T C G G A T C A C T G A C T G G A T C C G T A
C A T G T C G A A G T C C T G A C G A T T A C G G A C T G A T C A G C T C T A G C T A G C T G A A G T C C G T A G A C T A T C G G A C T G T A C A C G T

TP53/MA0106.3/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ATGTCTGGACGHGGHA
GACATGCCCGGGCATGTT-
 A C G T A C G T A C G T C G T A A C G T A C T G A G C T A G T C G C A T A C T G A C T G C T G A A G T C A T C G G A T C A C T G A C T G G A T C C G T A
C T A G C T G A G A T C C G T A C G A T T A C G G A T C G A T C G A T C T C A G C T A G C T A G A G T C C G T A G C A T C T A G G A C T G A C T A C G T

p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ATGTCTGGACGHGGHA-
RRCATGYCHGGACWTGYYYN
 A C G T A C G T A C G T C G T A A C G T A C T G A G C T A G T C G C A T A C T G A C T G C T G A A G T C A T C G G A T C A C T G A C T G G A T C C G T A A C G T
C T A G C T A G A G T C G C T A C G A T A C T G G A C T G A T C G A C T T C A G C T A G C T G A A T G C G C A T C G A T A C T G G A C T G A T C G A C T C G A T