Information for 3-GTCACACAGCCACGTG (Motif 4)

A T C G A G C T A T G C G T C A G T A C C G T A A G T C C G T A C A T G G T A C T G A C G T C A G T A C C T A G A G C T A C T G
Reverse Opposite:
A G T C C T G A A G T C A C T G A C G T A C T G A C T G G A T C C G A T A C T G C G A T A C T G A C G T A T C G C T G A A T G C
p-value:1e-11
log p-value:-2.725e+01
Information Content per bp:1.785
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.1 +/- 19.6bp
Average Position of motif in Background36.2 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mycn/MA0104.3/Jaspar

Match Rank:1
Score:0.62
Offset:8
Orientation:forward strand
Alignment:GTCACACAGCCACGTG
--------GCCACGTG
 A T C G A G C T A T G C G T C A G T A C C G T A A G T C C G T A C A T G G T A C T G A C G T C A G T A C C T A G A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.60
Offset:8
Orientation:forward strand
Alignment:GTCACACAGCCACGTG
--------NCCACGTG
 A T C G A G C T A T G C G T C A G T A C C G T A A G T C C G T A C A T G G T A C T G A C G T C A G T A C C T A G A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G

Creb3l2/MA0608.1/Jaspar

Match Rank:3
Score:0.60
Offset:8
Orientation:forward strand
Alignment:GTCACACAGCCACGTG-
--------GCCACGTGT
 A T C G A G C T A T G C G T C A G T A C C G T A A G T C C G T A C A T G G T A C T G A C G T C A G T A C C T A G A G C T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.59
Offset:7
Orientation:forward strand
Alignment:GTCACACAGCCACGTG-
-------NNCCACGTGG
 A T C G A G C T A T G C G T C A G T A C C G T A A G T C C G T A C A T G G T A C T G A C G T C A G T A C C T A G A G C T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.59
Offset:8
Orientation:forward strand
Alignment:GTCACACAGCCACGTG--
--------KCCACGTGAC
 A T C G A G C T A T G C G T C A G T A C C G T A A G T C C G T A C A T G G T A C T G A C G T C A G T A C C T A G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.58
Offset:7
Orientation:forward strand
Alignment:GTCACACAGCCACGTG-
-------NNCCACGTGG
 A T C G A G C T A T G C G T C A G T A C C G T A A G T C C G T A C A T G G T A C T G A C G T C A G T A C C T A G A G C T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GTCACACAGCCACGTG--
------NNACCACGTGGT
 A T C G A G C T A T G C G T C A G T A C C G T A A G T C C G T A C A T G G T A C T G A C G T C A G T A C C T A G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.58
Offset:8
Orientation:forward strand
Alignment:GTCACACAGCCACGTG
--------NVCACGTG
 A T C G A G C T A T G C G T C A G T A C C G T A A G T C C G T A C A T G G T A C T G A C G T C A G T A C C T A G A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.58
Offset:8
Orientation:forward strand
Alignment:GTCACACAGCCACGTG
--------GNCACGTG
 A T C G A G C T A T G C G T C A G T A C C G T A A G T C C G T A C A T G G T A C T G A C G T C A G T A C C T A G A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.58
Offset:8
Orientation:forward strand
Alignment:GTCACACAGCCACGTG
--------GHCACGTG
 A T C G A G C T A T G C G T C A G T A C C G T A A G T C C G T A C A T G G T A C T G A C G T C A G T A C C T A G A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G