Information for 17-ATGTCAACTT (Motif 25)

G T C A A C G T A C T G A C G T A G T C C G T A C T G A A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A G C T A C G T A C T G C G T A A G T C C G T A A C G T
p-value:1e-7
log p-value:-1.713e+01
Information Content per bp:1.942
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif17.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets33.3 +/- 26.6bp
Average Position of motif in Background48.2 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.78
Offset:1
Orientation:forward strand
Alignment:ATGTCAACTT
-TGTCANYT-
 G T C A A C G T A C T G A C G T A G T C C G T A C T G A A G T C A C G T A C G T
A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:ATGTCAACTT
NTGTCAN---
 G T C A A C G T A C T G A C G T A G T C C G T A C T G A A G T C A C G T A C G T
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-ATGTCAACTT
CCTGTCAA---
 A C G T G T C A A C G T A C T G A C G T A G T C C G T A C T G A A G T C A C G T A C G T
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-ATGTCAACTT
GCTGTCAA---
 A C G T G T C A A C G T A C T G A C G T A G T C C G T A C T G A A G T C A C G T A C G T
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ATGTCAACTT
RHTGWCAR---
 A C G T G T C A A C G T A C T G A C G T A G T C C G T A C T G A A G T C A C G T A C G T
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ATGTCAACTT
VGCTGWCAVB--
 A C G T A C G T G T C A A C G T A C T G A C G T A G T C C G T A C T G A A G T C A C G T A C G T
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ATGTCAACTT-
SCTGTCARCACC
 A C G T G T C A A C G T A C T G A C G T A G T C C G T A C T G A A G T C A C G T A C G T A C G T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ATGTCAACTT---
ACTATGCCAACCTACC
 A C G T A C G T A C G T G T C A A C G T A C T G A C G T A G T C C G T A C T G A A G T C A C G T A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATGTCAACTT
ATGCCAACC-
 G T C A A C G T A C T G A C G T A G T C C G T A C T G A A G T C A C G T A C G T
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------ATGTCAACTT
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C T G A C G T A G T C C G T A C T G A A G T C A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T