Information for 8-WGCCAGGGASACAGCG (Motif 11)

C G T A A C T G A G T C A G T C G C T A A C T G C T A G A C T G G T C A T A G C G T C A A G T C C G T A A C T G A T G C A C T G
Reverse Opposite:
G T A C T A C G T G A C A C G T A C T G A C G T A T C G A C G T G T A C A G T C G T A C C G A T C T A G A C T G A G T C G C A T
p-value:1e-10
log p-value:-2.492e+01
Information Content per bp:1.737
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.6 +/- 20.2bp
Average Position of motif in Background78.6 +/- 12.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-WGCCAGGGASACAGCG
TTGCCATGGCAACN---
 A C G T C G T A A C T G A G T C A G T C G C T A A C T G C T A G A C T G G T C A T A G C G T C A A G T C C G T A A C T G A T G C A C T G
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T A C G T A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-WGCCAGGGASACAGCG
TTGCCATGGCAACC---
 A C G T C G T A A C T G A G T C A G T C G C T A A C T G C T A G A C T G G T C A T A G C G T C A A G T C C G T A A C T G A T G C A C T G
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C A C G T A C G T A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--WGCCAGGGASACAGCG
GTTGCCATGGCAACCG--
 A C G T A C G T C G T A A C T G A G T C A G T C G C T A A C T G C T A G A C T G G T C A T A G C G T C A A G T C C G T A A C T G A T G C A C T G
C T A G A G C T G A C T C T A G A G T C A G T C G T C A C G A T T C A G T C A G G A T C C T G A T C G A G A T C T A G C T C A G A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--WGCCAGGGASACAGCG
GTTGCCATGGNAAC----
 A C G T A C G T C G T A A C T G A G T C A G T C G C T A A C T G C T A G A C T G G T C A T A G C G T C A A G T C C G T A A C T G A T G C A C T G
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C A C G T A C G T A C G T A C G T

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--WGCCAGGGASACAGCG
GTTGCCATGGCAACM---
 A C G T A C G T C G T A A C T G A G T C A G T C G C T A A C T G C T A G A C T G G T C A T A G C G T C A A G T C C G T A A C T G A T G C A C T G
C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C T G A C A C G T A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:6
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:WGCCAGGGASACAGCG
------GTAAACAG--
 C G T A A C T G A G T C A G T C G C T A A C T G C T A G A C T G G T C A T A G C G T C A A G T C C G T A A C T G A T G C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T

RFX3/MA0798.1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---WGCCAGGGASACAGCG
CGTTGCCATGGCAACG---
 A C G T A C G T A C G T C G T A A C T G A G T C A G T C G C T A A C T G C T A G A C T G G T C A T A G C G T C A A G T C C G T A A C T G A T G C A C T G
A T G C C T A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G A C G T A C G T A C G T

RFX4/MA0799.1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---WGCCAGGGASACAGCG
CGTTGCCATGGCAACN---
 A C G T A C G T A C G T C G T A A C T G A G T C A G T C G C T A A C T G C T A G A C T G G T C A T A G C G T C A A G T C C G T A A C T G A T G C A C T G
A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C G T A G A T C T A C G A C G T A C G T A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:WGCCAGGGASACAGCG
----ATGTAAACADGS
 C G T A A C T G A G T C A G T C G C T A A C T G C T A G A C T G G T C A T A G C G T C A A G T C C G T A A C T G A T G C A C T G
A C G T A C G T A C G T A C G T C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:WGCCAGGGASACAGCG
---------CACAGN-
 C G T A A C T G A G T C A G T C G C T A A C T G C T A G A C T G G T C A T A G C G T C A A G T C C G T A A C T G A T G C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T