Information for 4-AGGTCAGAGGTGWTGT (Motif 9)

C G T A A C T G A C T G A C G T A G T C C G T A C A T G C G T A A C T G T A C G C A G T A C T G C G A T A C G T T C A G A G C T
Reverse Opposite:
C T G A A G T C T C G A C G T A T A G C G C T A A G T C T G A C A C G T G A T C C G A T C T A G T C G A G T A C G T A C A C G T
p-value:1e-10
log p-value:-2.495e+01
Information Content per bp:1.689
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif24.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets41.1 +/- 25.7bp
Average Position of motif in Background48.1 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-AGGTCAGAGGTGWTGT
GAGGTCAAAGGTCA---
 A C G T C G T A A C T G A C T G A C G T A G T C C G T A C A T G C G T A A C T G T A C G C A G T A C T G C G A T A C G T T C A G A G C T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AGGTCAGAGGTGWTGT
AGGGGTCAGAGGTCA---
 A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A C A T G C G T A A C T G T A C G C A G T A C T G C G A T A C G T T C A G A G C T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-AGGTCAGAGGTGWTGT
GAGGTCAAAGGTCA---
 A C G T C G T A A C T G A C T G A C G T A G T C C G T A C A T G C G T A A C T G T A C G C A G T A C T G C G A T A C G T T C A G A G C T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGGTCAGAGGTGWTGT
TAGGGCAAAGGTCA---
 A C G T C G T A A C T G A C T G A C G T A G T C C G T A C A T G C G T A A C T G T A C G C A G T A C T G C G A T A C G T T C A G A G C T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AGGTCAGAGGTGWTGT
GTAGGGCAAAGGTCA---
 A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A C A T G C G T A A C T G T A C G C A G T A C T G C G A T A C G T T C A G A G C T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGGTCAGAGGTGWTGT
GGGGTCAAAGGTCA---
 A C G T C G T A A C T G A C T G A C G T A G T C C G T A C A T G C G T A A C T G T A C G C A G T A C T G C G A T A C G T T C A G A G C T
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGGTCAGAGGTGWTGT
GGGGTCAAAGGTCA---
 A C G T C G T A A C T G A C T G A C G T A G T C C G T A C A T G C G T A A C T G T A C G C A G T A C T G C G A T A C G T T C A G A G C T
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A A C G T A C G T A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGGTCAGAGGTGWTGT
AAAGGTCAAAGGTCAAC-
 A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A C A T G C G T A A C T G T A C G C A G T A C T G C G A T A C G T T C A G A G C T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C A C G T

RXRB/MA0855.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGGTCAGAGGTGWTGT
GGGGTCAAAGGTCA---
 A C G T C G T A A C T G A C T G A C G T A G T C C G T A C A T G C G T A A C T G T A C G C A G T A C T G C G A T A C G T T C A G A G C T
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGGTCAGAGGTGWTGT
TGGGGCAAAGGTCA---
 A C G T C G T A A C T G A C T G A C G T A G T C C G T A C A T G C G T A A C T G T A C G C A G T A C T G C G A T A C G T T C A G A G C T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T