Information for 8-GTGGAWACCACTA (Motif 6)

A C T G A C G T A C T G A C T G C G T A C G A T C G T A A G T C G T A C C G T A G T A C A C G T C G T A
Reverse Opposite:
G A C T C G T A A C T G A C G T A C T G A C T G G A C T C G T A A C G T G T A C A G T C G T C A A G T C
p-value:1e-13
log p-value:-3.082e+01
Information Content per bp:1.833
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 29.2bp
Average Position of motif in Background60.3 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTGGAWACCACTA
GTGGAT-------
 A C T G A C G T A C T G A C T G C G T A C G A T C G T A A G T C G T A C C G T A G T A C A C G T C G T A
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTGGAWACCACTA
AGGGGATTCCCCT-
 A C G T A C T G A C G T A C T G A C T G C G T A C G A T C G T A A G T C G T A C C G T A G T A C A C G T C G T A
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTGGAWACCACTA
AGGGGATTCCCCT-
 A C G T A C T G A C G T A C T G A C T G C G T A C G A T C G T A A G T C G T A C C G T A G T A C A C G T C G T A
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTGGAWACCACTA
NNTGTGGATTSS----
 A C G T A C G T A C G T A C T G A C G T A C T G A C T G C G T A C G A T C G T A A G T C G T A C C G T A G T A C A C G T C G T A
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTGGAWACCACTA
TGTGGATTNNN---
 A C G T A C T G A C G T A C T G A C T G C G T A C G A T C G T A A G T C G T A C C G T A G T A C A C G T C G T A
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GTGGAWACCACTA
CTACTTGGATACGGAAT
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G C G T A C G A T C G T A A G T C G T A C C G T A G T A C A C G T C G T A
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTGGAWACCACTA
GTGGGCCCCA---
 A C T G A C G T A C T G A C T G C G T A C G A T C G T A A G T C G T A C C G T A G T A C A C G T C G T A
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTGGAWACCACTA
GGGGGAATCCCC--
 A C G T A C T G A C G T A C T G A C T G C G T A C G A T C G T A A G T C G T A C C G T A G T A C A C G T C G T A
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:9
Score:0.56
Offset:-8
Orientation:forward strand
Alignment:--------GTGGAWACCACTA--
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G C G T A C G A T C G T A A G T C G T A C C G T A G T A C A C G T C G T A A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GTGGAWACCACTA-
----AAACCACANN
 A C T G A C G T A C T G A C T G C G T A C G A T C G T A A G T C G T A C C G T A G T A C A C G T C G T A A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A