Information for 4-TTTGTMYCCCMGR (Motif 3)

A C G T A C G T A C G T A C T G A C G T G T A C A G C T A G T C A G T C A G T C G T C A A C T G C T A G
Reverse Opposite:
G A T C A G T C C A G T A C T G A C T G A C T G T C G A A C T G C G T A A G T C C G T A G T C A C G T A
p-value:1e-15
log p-value:-3.554e+01
Information Content per bp:1.872
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.8 +/- 20.0bp
Average Position of motif in Background58.3 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTTGTMYCCCMGR
CCTTTGTTTT-----
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C A G C T A G T C A G T C A G T C G T C A A C T G C T A G
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTTGTMYCCCMGR
YCTTTGTTCC-----
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C A G C T A G T C A G T C A G T C G T C A A C T G C T A G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTTGTMYCCCMGR
CCWTTGTYYB-----
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C A G C T A G T C A G T C A G T C G T C A A C T G C T A G
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTTGTMYCCCMGR
CCATTGTTNY-----
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C A G C T A G T C A G T C A G T C G T C A A C T G C T A G
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTTGTMYCCCMGR
CTTTGT--------
 A C G T A C G T A C G T A C G T A C T G A C G T G T A C A G C T A G T C A G T C A G T C G T C A A C T G C T A G
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTTGTMYCCCMGR--
NNNNGGTACCCCCCANN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C A G C T A G T C A G T C A G T C G T C A A C T G C T A G A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTTGTMYCCCMGR
CCWTTGTY-------
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C A G C T A G T C A G T C A G T C G T C A A C T G C T A G
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTTGTMYCCCMGR
CCATTGTTTT-----
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C A G C T A G T C A G T C A G T C G T C A A C T G C T A G
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGTMYCCCMGR
ANTCCTTTGTCTNNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C A G C T A G T C A G T C A G T C G T C A A C T G C T A G
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTTGTMYCCCMGR
WCATTTTGKCCTCYT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C A G C T A G T C A G T C A G T C G T C A A C T G C T A G
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T A C G T A C G T