Information for 12-GGCCTCTGAATGA (Motif 16)

A C T G A C T G A G T C A G T C C G A T A G T C C G A T A C T G C G T A C G T A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C G T A C G T A G T C G C T A A C T G C G T A A C T G A C T G A G T C A G T C
p-value:1e-6
log p-value:-1.417e+01
Information Content per bp:1.946
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.4 +/- 29.1bp
Average Position of motif in Background68.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGCCTCTGAATGA-----
--ACTATGAATGAATGAT
 A C T G A C T G A G T C A G T C C G A T A G T C C G A T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGCCTCTGAATGA---
BTGACCTCTNNHTGACCY
 A C G T A C G T A C T G A C T G A G T C A G T C C G A T A G T C C G A T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T
A T C G A C G T A T C G T G C A G T A C A G T C A G C T A T G C C G A T T A C G A T G C G T A C G A C T T A C G T G C A G T A C G A T C A G C T

RARA(var.2)/MA0730.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTCTGAATGA---
TGACCTTTGCATGACCT
 A C G T A C T G A C T G A G T C A G T C C G A T A G T C C G A T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T
G A C T T A C G T G C A T G A C G T A C A G C T A G C T G C A T T C A G T A G C C T G A A C G T C T A G T G C A T G A C G T A C A G C T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GGCCTCTGAATGA
CNAGGCCT--------
 A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G A T A G T C C G A T A C T G C G T A C G T A A C G T A C T G C G T A
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rarb(var.2)/MA0858.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTCTGAATGA---
TGACCTTTANTTGACCT
 A C G T A C T G A C T G A G T C A G T C C G A T A G T C C G A T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T
G A C T C T A G T G C A T G A C A G T C G A C T A G C T G C A T T C G A A C T G C A G T A G C T A T C G C T G A G T A C A T G C A G C T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGCCTCTGAATGA
RGGGCACTAACY--
 A C G T A C T G A C T G A G T C A G T C C G A T A G T C C G A T A C T G C G T A C G T A A C G T A C T G C G T A
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GGCCTCTGAATGA
CTAGGCCT--------
 A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G A T A G T C C G A T A C T G C G T A C G T A A C G T A C T G C G T A
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RARA::RXRA/MA0159.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTCTGAATGA---
TGACCTCTCNNTGACCT
 A C G T A C T G A C T G A G T C A G T C C G A T A G T C C G A T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T
G A C T T A C G G T C A T G A C A G T C A C G T A T G C G A C T A G T C A T G C T C A G A G C T T A C G G T C A G T A C A G T C A G C T

PBX1/MA0070.1/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GGCCTCTGAATGA---
----TTTGATTGATGN
 A C T G A C T G A G T C A G T C C G A T A G T C C G A T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.53
Offset:-8
Orientation:forward strand
Alignment:--------GGCCTCTGAATGA
GGGGCCGAGGCCTG-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G A T A G T C C G A T A C T G C G T A C G T A A C G T A C T G C G T A
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T