Information for 9-CAGGTGACATTTT (Motif 10)

A G T C G T C A A C T G A C T G A C G T A C T G C T G A A T G C C G T A A C G T A C G T A C G T C G A T
Reverse Opposite:
C G T A C G T A C G T A C G T A A C G T A T C G A G C T T G A C C G T A A G T C G T A C A C G T A C T G
p-value:1e-10
log p-value:-2.495e+01
Information Content per bp:1.863
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.6 +/- 32.9bp
Average Position of motif in Background54.0 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0053.1_Rara_1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CAGGTGACATTTT---
NNNGTGACCTTTGNNN
 A G T C G T C A A C T G A C T G A C G T A C T G C T G A A T G C C G T A A C G T A C G T A C G T C G A T A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CAGGTGACATTTT---
----TGACCTTTNCNT
 A G T C G T C A A C T G A C T G A C G T A C T G C T G A A T G C C G T A A C G T A C G T A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CAGGTGACATTTT---
NNNNTGACCTTTNNNN
 A G T C G T C A A C T G A C T G A C G T A C T G C T G A A T G C C G T A A C G T A C G T A C G T C G A T A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

USF2/MA0526.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAGGTGACATTTT
GTCATGTGACC----
 A C G T A C G T A G T C G T C A A C T G A C T G A C G T A C T G C T G A A T G C C G T A A C G T A C G T A C G T C G A T
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CAGGTGACATTTT
RTCATGTGAC-----
 A C G T A C G T A G T C G T C A A C T G A C T G A C G T A C T G C T G A A T G C C G T A A C G T A C G T A C G T C G A T
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGACATTTT
NNCAGGTGNN-----
 A C G T A C G T A G T C G T C A A C T G A C T G A C G T A C T G C T G A A T G C C G T A A C G T A C G T A C G T C G A T
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGGTGACATTTT
GCCACGTGACC----
 A C G T A C G T A G T C G T C A A C T G A C T G A C G T A C T G C T G A A T G C C G T A A C G T A C G T A C G T C G A T
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAGGTGACATTTT
CNNTTGACCTTTG
 A G T C G T C A A C T G A C T G A C G T A C T G C T G A A T G C C G T A A C G T A C G T A C G T C G A T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CAGGTGACATTTT
---GTGACCTT--
 A G T C G T C A A C T G A C T G A C G T A C T G C T G A A T G C C G T A A C G T A C G T A C G T C G A T
A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAGGTGACATTTT
NCACGTGACN----
 A C G T A G T C G T C A A C T G A C T G A C G T A C T G C T G A A T G C C G T A A C G T A C G T A C G T C G A T
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T A C G T A C G T A C G T