Information for 18-GGCAGCTGGT (Motif 35)

T A C G A C T G A G T C G C T A T C A G A T G C A C G T A C T G A C T G A G C T
Reverse Opposite:
T C G A G T A C A G T C C G T A A T C G A G T C C G A T C T A G A G T C A T G C
p-value:1e-4
log p-value:-1.053e+01
Information Content per bp:1.737
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif4.33%
Number of Background Sequences with motif827.3
Percentage of Background Sequences with motif1.76%
Average Position of motif in Targets59.6 +/- 26.7bp
Average Position of motif in Background51.8 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2/MA0816.1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GGCAGCTGGT
AGCAGCTGCT
 T A C G A C T G A G T C G C T A T C A G A T G C A C G T A C T G A C T G A G C T
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGCTGGT---
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T T A C G A C T G A G T C G C T A T C A G A T G C A C G T A C T G A C T G A G C T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:3
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GGCAGCTGGT
VNAVCAGCTGGC
 A C G T A C G T T A C G A C T G A G T C G C T A T C A G A T G C A C G T A C T G A C T G A G C T
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GGCAGCTGGT-
-GCAGCTGTNN
 T A C G A C T G A G T C G C T A T C A G A T G C A C G T A C T G A C T G A G C T A C G T
A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:5
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GGCAGCTGGT--
NVCAGCTGBBNN
 T A C G A C T G A G T C G C T A T C A G A T G C A C G T A C T G A C T G A G C T A C G T A C G T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:6
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GGCAGCTGGT-
-VCAGCTGBNN
 T A C G A C T G A G T C G C T A T C A G A T G C A C G T A C T G A C T G A G C T A C G T
A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GGCAGCTGGT
NNAGCAGCTGCT
 A C G T A C G T T A C G A C T G A G T C G C T A T C A G A T G C A C G T A C T G A C T G A G C T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GGCAGCTGGT-
GACAGCTGCAG
 T A C G A C T G A G T C G C T A T C A G A T G C A C G T A C T G A C T G A G C T A C G T
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GGCAGCTGGT-
-NCAGCTGCTG
 T A C G A C T G A G T C G C T A T C A G A T G C A C G T A C T G A C T G A G C T A C G T
A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GGCAGCTGGT-
-ACAGCTGTTN
 T A C G A C T G A G T C G C T A T C A G A T G C A C G T A C T G A C T G A G C T A C G T
A C G T T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C