Information for 5-KGTTYKCCCCGAS (Motif 3)

A C T G A C T G A C G T A C G T A G C T C A T G G T A C G T A C A G T C A G T C A C T G C G T A A T C G
Reverse Opposite:
T A G C A C G T A G T C A C T G A C T G A C T G C A T G G T A C T C G A C G T A C G T A A G T C G T A C
p-value:1e-24
log p-value:-5.751e+01
Information Content per bp:1.864
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.6 +/- 20.2bp
Average Position of motif in Background36.6 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:KGTTYKCCCCGAS
-----TCCCCA--
 A C T G A C T G A C G T A C G T A G C T C A T G G T A C G T A C A G T C A G T C A C T G C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-KGTTYKCCCCGAS---
AAATTCCCCCCGGAAGT
 A C G T A C T G A C T G A C G T A C G T A G C T C A T G G T A C G T A C A G T C A G T C A C T G C G T A A T C G A C G T A C G T A C G T
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:KGTTYKCCCCGAS-
----TGCCCAGNHW
 A C T G A C T G A C G T A C G T A G C T C A T G G T A C G T A C A G T C A G T C A C T G C G T A A T C G A C G T
A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

PB0128.1_Gcm1_2/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:KGTTYKCCCCGAS-----
-NTCNTCCCCTATNNGNN
 A C T G A C T G A C G T A C G T A G C T C A T G G T A C G T A C A G T C A G T C A C T G C G T A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:KGTTYKCCCCGAS
---CTGCCCGCA-
 A C T G A C T G A C G T A C G T A G C T C A T G G T A C G T A C A G T C A G T C A C T G C G T A A T C G
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:KGTTYKCCCCGAS
---TTCCCCCTAC
 A C T G A C T G A C G T A C G T A G C T C A T G G T A C G T A C A G T C A G T C A C T G C G T A A T C G
A C G T A C G T A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--KGTTYKCCCCGAS--
NNANTTGACCCCTNNNN
 A C G T A C G T A C T G A C T G A C G T A C G T A G C T C A T G G T A C G T A C A G T C A G T C A C T G C G T A A T C G A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--KGTTYKCCCCGAS
GGGGATTCCCCC---
 A C G T A C G T A C T G A C T G A C G T A C G T A G C T C A T G G T A C G T A C A G T C A G T C A C T G C G T A A T C G
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-KGTTYKCCCCGAS
CNGTCCTCCC----
 A C G T A C T G A C T G A C G T A C G T A G C T C A T G G T A C G T A C A G T C A G T C A C T G C G T A A T C G
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:KGTTYKCCCCGAS------
--TACGCCCCGCCACTCTG
 A C T G A C T G A C G T A C G T A G C T C A T G G T A C G T A C A G T C A G T C A C T G C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G