Information for 20-SVGCCAGCGAGCN (Motif 29)

T A C G T C G A T A C G T A G C T A G C T C G A A T C G T A G C T A C G T C G A T A C G T A G C A T C G
Reverse Opposite:
T A G C A T C G A T G C A G C T A T G C A T C G T A G C A G C T A T C G A T C G A T G C A G C T A T G C
p-value:1e-7
log p-value:-1.771e+01
Information Content per bp:1.495
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.4 +/- 30.5bp
Average Position of motif in Background77.5 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:SVGCCAGCGAGCN
-TGCCCNGGGGCA
 T A C G T C G A T A C G T A G C T A G C T C G A A T C G T A G C T A C G T C G A T A C G T A G C A T C G
A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:SVGCCAGCGAGCN
-TGCCCTNGGGCA
 T A C G T C G A T A C G T A G C T A G C T C G A A T C G T A G C T A C G T C G A T A C G T A G C A T C G
A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:SVGCCAGCGAGCN-
CCGCCCAAGGGCAG
 T A C G T C G A T A C G T A G C T A G C T C G A A T C G T A G C T A C G T C G A T A C G T A G C A T C G A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

TFAP2C/MA0524.2/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:SVGCCAGCGAGCN
-TGCCCTNGGGCA
 T A C G T C G A T A C G T A G C T A G C T C G A A T C G T A G C T A C G T C G A T A C G T A G C A T C G
A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:SVGCCAGCGAGCN
-TGTCAGGGGGCG
 T A C G T C G A T A C G T A G C T A G C T C G A A T C G T A G C T A C G T C G A T A C G T A G C A T C G
A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

NRF1/MA0506.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:SVGCCAGCGAGCN
GCGCCTGCGCA--
 T A C G T C G A T A C G T A G C T A G C T C G A A T C G T A G C T A C G T C G A T A C G T A G C A T C G
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:forward strand
Alignment:SVGCCAGCGAGCN
-----AGCGCGCC
 T A C G T C G A T A C G T A G C T A G C T C G A A T C G T A G C T A C G T C G A T A C G T A G C A T C G
A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-SVGCCAGCGAGCN
CGTGCCAAG-----
 A C G T T A C G T C G A T A C G T A G C T A G C T C G A A T C G T A G C T A C G T C G A T A C G T A G C A T C G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:SVGCCAGCGAGCN
GAGSCCGAGC---
 T A C G T C G A T A C G T A G C T A G C T C G A A T C G T A G C T A C G T C G A T A C G T A G C A T C G
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:SVGCCAGCGAGCN--
-TGGCAGNCTGCCAG
 T A C G T C G A T A C G T A G C T A G C T C G A A T C G T A G C T A C G T C G A T A C G T A G C A T C G A C G T A C G T
A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G