Information for 18-MSCSCGSGKCGCAAGS (Motif 22)

G T C A T A C G A G T C A T G C A G T C A C T G A T C G A C T G A C G T A G T C A C T G A G T C C G T A C G T A A C T G T A C G
Reverse Opposite:
A T C G A G T C A C G T C G A T A C T G A G T C A C T G T G C A A G T C A T G C A G T C A C T G A T C G A C T G A T C G A C G T
p-value:1e-8
log p-value:-1.951e+01
Information Content per bp:1.835
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.6 +/- 21.4bp
Average Position of motif in Background67.3 +/- 1.1bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcfl5/MA0632.1/Jaspar

Match Rank:1
Score:0.53
Offset:0
Orientation:forward strand
Alignment:MSCSCGSGKCGCAAGS
GGCACGTGCC------
 G T C A T A C G A G T C A T G C A G T C A C T G A T C G A C T G A C G T A G T C A C T G A G T C C G T A C G T A A C T G T A C G
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:2
Score:0.51
Offset:5
Orientation:forward strand
Alignment:MSCSCGSGKCGCAAGS---
-----GGGGCCCAAGGGGG
 G T C A T A C G A G T C A T G C A G T C A C T G A T C G A C T G A C G T A G T C A C T G A G T C C G T A C G T A A C T G T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---MSCSCGSGKCGCAAGS
ACCCCCCCGGGGGGN----
 A C G T A C G T A C G T G T C A T A C G A G T C A T G C A G T C A C T G A T C G A C T G A C G T A G T C A C T G A G T C C G T A C G T A A C T G T A C G
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:4
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:MSCSCGSGKCGCAAGS
TGCCCNNAGGGCA---
 G T C A T A C G A G T C A T G C A G T C A C T G A T C G A C T G A C G T A G T C A C T G A G T C C G T A C G T A A C T G T A C G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--MSCSCGSGKCGCAAGS
CCCCCCCGGGGGGGT---
 A C G T A C G T G T C A T A C G A G T C A T G C A G T C A C T G A T C G A C T G A C G T A G T C A C T G A G T C C G T A C G T A A C T G T A C G
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:6
Score:0.50
Offset:0
Orientation:forward strand
Alignment:MSCSCGSGKCGCAAGS
TGCCCTGAGGGCA---
 G T C A T A C G A G T C A T G C A G T C A C T G A T C G A C T G A C G T A G T C A C T G A G T C C G T A C G T A A C T G T A C G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:MSCSCGSGKCGCAAGS
GGCACGCGTC------
 G T C A T A C G A G T C A T G C A G T C A C T G A T C G A C T G A C G T A G T C A C T G A G T C C G T A C G T A A C T G T A C G
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T A C G T A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---MSCSCGSGKCGCAAGS
GACCCCCCGCTGCGC----
 A C G T A C G T A C G T G T C A T A C G A G T C A T G C A G T C A C T G A T C G A C T G A C G T A G T C A C T G A G T C C G T A C G T A A C T G T A C G
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:9
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:MSCSCGSGKCGCAAGS--
-------TGCGCAGGCGC
 G T C A T A C G A G T C A T G C A G T C A C T G A T C G A C T G A C G T A G T C A C T G A G T C C G T A C G T A A C T G T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

PB0101.1_Zic1_1/Jaspar

Match Rank:10
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--MSCSCGSGKCGCAAGS
CACCCCCGGGGGGG----
 A C G T A C G T G T C A T A C G A G T C A T G C A G T C A C T G A T C G A C T G A C G T A G T C A C T G A G T C C G T A C G T A A C T G T A C G
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T A C G T