Information for 14-TCTGGGTTGTTCG (Motif 20)

A C G T A G T C A G C T A C T G A C T G A C T G A G C T A C G T A C T G A C G T A G C T A T G C C T A G
Reverse Opposite:
A G T C T A C G C T G A T C G A T A G C T G C A C T G A A G T C A G T C G T A C T C G A C T A G G T C A
p-value:1e-8
log p-value:-2.038e+01
Information Content per bp:1.673
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif164.5
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets59.4 +/- 18.9bp
Average Position of motif in Background52.7 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TCTGGGTTGTTCG
CGTGGGTGGTCC-
 A C G T A G T C A G C T A C T G A C T G A C T G A G C T A C G T A C T G A C G T A G C T A T G C C T A G
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T

HSF4/MA0771.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCTGGGTTGTTCG
TTCTAGAACGTTC-
 A C G T A C G T A G T C A G C T A C T G A C T G A C T G A G C T A C G T A C T G A C G T A G C T A T G C C T A G
C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCTGGGTTGTTCG
GGTCTGGCAT-----
 A C G T A C G T A C G T A G T C A G C T A C T G A C T G A C T G A G C T A C G T A C T G A C G T A G C T A T G C C T A G
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T

HSF1/MA0486.2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCTGGGTTGTTCG
TTCTAGAACGTTC-
 A C G T A C G T A G T C A G C T A C T G A C T G A C T G A G C T A C G T A C T G A C G T A G C T A T G C C T A G
C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C A C G T

HSF2/MA0770.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCTGGGTTGTTCG
TTCTAGAACGTTC-
 A C G T A C G T A G T C A G C T A C T G A C T G A C T G A G C T A C G T A C T G A C G T A G C T A T G C C T A G
C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------TCTGGGTTGTTCG
NNTNNTGTCTGGNNTNG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A C T G A C T G A C T G A G C T A C G T A C T G A C G T A G C T A T G C C T A G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T A C G T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TCTGGGTTGTTCG
GTACATCCGGATTTTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A C T G A C T G A C T G A G C T A C G T A C T G A C G T A G C T A T G C C T A G
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TCTGGGTTGTTCG
AGTATTCTCGGTTGC---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A C T G A C T G A C T G A G C T A C G T A C T G A C G T A G C T A T G C C T A G
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C A C G T A C G T A C G T

SPDEF/MA0686.1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TCTGGGTTGTTCG
TACATCCGGGT------
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T A C T G A C T G A C T G A G C T A C G T A C T G A C G T A G C T A T G C C T A G
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

ELF1/MA0473.2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TCTGGGTTGTTCG
NACTTCCGGGTT-----
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T A C T G A C T G A C T G A G C T A C G T A C T G A C G T A G C T A T G C C T A G
A G T C C T G A G A T C C G A T A G C T A G T C A G T C A C T G A T C G C A T G C G A T G C A T A C G T A C G T A C G T A C G T A C G T