Information for 5-GCAGCTGGGTAGAGGC (Motif 9)

A T C G A G T C C G T A C T A G A G T C A C G T A C T G A T C G A C T G A C G T C T G A A T C G C T G A T A C G A C T G A G T C
Reverse Opposite:
T C A G T G A C A T G C A G C T A T G C A G C T T G C A A G T C A T G C A G T C T G C A A C T G A G T C C G A T T A C G A T G C
p-value:1e-11
log p-value:-2.742e+01
Information Content per bp:1.723
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.3 +/- 27.6bp
Average Position of motif in Background35.9 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCTGGGTAGAGGC
CGCAGCTGCG-------
 A C G T A T C G A G T C C G T A C T A G A G T C A C G T A C T G A T C G A C T G A C G T C T G A A T C G C T G A T A C G A C T G A G T C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCAGCTGGGTAGAGGC
GCAGCTGTNN------
 A T C G A G T C C G T A C T A G A G T C A C G T A C T G A T C G A C T G A C G T C T G A A T C G C T G A T A C G A C T G A G T C
T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCTGGGTAGAGGC
CAGCAGCTGN--------
 A C G T A C G T A T C G A G T C C G T A C T A G A G T C A C G T A C T G A T C G A C T G A C G T C T G A A T C G C T G A T A C G A C T G A G T C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCAGCTGGGTAGAGGC
NAACAGCTGG--------
 A C G T A C G T A T C G A G T C C G T A C T A G A G T C A C G T A C T G A T C G A C T G A C G T C T G A A T C G C T G A T A C G A C T G A G T C
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTGGGTAGAGGC
GACAGCTGCAG------
 A C G T A T C G A G T C C G T A C T A G A G T C A C G T A C T G A T C G A C T G A C G T C T G A A T C G C T G A T A C G A C T G A G T C
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCTGGGTAGAGGC
NVCAGCTGBBNN-----
 A C G T A T C G A G T C C G T A C T A G A G T C A C G T A C T G A T C G A C T G A C G T C T G A A T C G C T G A T A C G A C T G A G T C
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T A C G T A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCAGCTGGGTAGAGGC
VCAGCTGBNN------
 A T C G A G T C C G T A C T A G A G T C A C G T A C T G A T C G A C T G A C G T C T G A A T C G C T G A T A C G A C T G A G T C
T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGCTGGGTAGAGGC
NNNNAGCAGCTGCTGAN----
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A C T A G A G T C A C G T A C T G A T C G A C T G A C G T C T G A A T C G C T G A T A C G A C T G A G T C
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCAGCTGGGTAGAGGC
HCAGCTGDTN------
 A T C G A G T C C G T A C T A G A G T C A C G T A C T G A T C G A C T G A C G T C T G A A T C G C T G A T A C G A C T G A G T C
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTGGGTAGAGGC
AACAGCTGCAG------
 A C G T A T C G A G T C C G T A C T A G A G T C A C G T A C T G A T C G A C T G A C G T C T G A A T C G C T G A T A C G A C T G A G T C
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T