Information for 22-YGAAATWAGRGCA (Motif 34)

G A T C C T A G C G T A C G T A C G T A A G C T G C A T C G T A A C T G C T A G C T A G A G T C C G T A
Reverse Opposite:
C G A T A C T G A G T C A G T C A G T C C G A T C G T A T C G A A C G T A C G T A C G T A G T C C T A G
p-value:1e-6
log p-value:-1.530e+01
Information Content per bp:1.778
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif8.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.3 +/- 28.0bp
Average Position of motif in Background38.9 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:YGAAATWAGRGCA
--AAATCACAGCA
 G A T C C T A G C G T A C G T A C G T A A G C T G C A T C G T A A C T G C T A G C T A G A G T C C G T A
A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:YGAAATWAGRGCA
-GWAAYHTGABMC
 G A T C C T A G C G T A C G T A C G T A A G C T G C A T C G T A A C T G C T A G C T A G A G T C C G T A
A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:YGAAATWAGRGCA
--AAATCACTGC-
 G A T C C T A G C G T A C G T A C G T A A G C T G C A T C G T A A C T G C T A G C T A G A G T C C G T A
A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:YGAAATWAGRGCA
---AAYTAGGTCA
 G A T C C T A G C G T A C G T A C G T A A G C T G C A T C G T A A C T G C T A G C T A G A G T C C G T A
A C G T A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

PH0037.1_Hdx/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----YGAAATWAGRGCA
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T A C G T G A T C C T A G C G T A C G T A C G T A A G C T G C A T C G T A A C T G C T A G C T A G A G T C C G T A
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:YGAAATWAGRGCA
-GWAAYHTGAKMC
 G A T C C T A G C G T A C G T A C G T A A G C T G C A T C G T A A C T G C T A G C T A G A G T C C G T A
A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

RORA(var.2)/MA0072.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:YGAAATWAGRGCA-
TATAAGTAGGTCAA
 G A T C C T A G C G T A C G T A C G T A A G C T G C A T C G T A A C T G C T A G C T A G A G T C C G T A A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--YGAAATWAGRGCA
ACTGAAACCA-----
 A C G T A C G T G A T C C T A G C G T A C G T A C G T A A G C T G C A T C G T A A C T G C T A G C T A G A G T C C G T A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:YGAAATWAGRGCA-----
--NNNNTTGGGCACNNCN
 G A T C C T A G C G T A C G T A C G T A A G C T G C A T C G T A A C T G C T A G C T A G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

HOXA5/MA0158.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:YGAAATWAGRGCA
---AATTAGTG--
 G A T C C T A G C G T A C G T A C G T A A G C T G C A T C G T A A C T G C T A G C T A G A G T C C G T A
A C G T A C G T A C G T T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T A C G T