Information for 12-CTAGCTATTC (Motif 31)

A T G C A C G T G T C A T A C G A G T C A C G T T C G A A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C G T C G T A C T A G A T G C A C G T C G T A A T C G
p-value:1e-7
log p-value:-1.711e+01
Information Content per bp:1.816
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif30.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets50.1 +/- 29.3bp
Average Position of motif in Background45.8 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CTAGCTATTC----
----CTATTTTTGG
 A T G C A C G T G T C A T A C G A G T C A C G T T C G A A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

PH0139.1_Pitx3/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTAGCTATTC-----
GNNAGCTAATCCCCCN
 A C G T A T G C A C G T G T C A T A C G A G T C A C G T T C G A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CTAGCTATTC----
----CTGTTCCTGG
 A T G C A C G T G T C A T A C G A G T C A C G T T C G A A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTAGCTATTC--
--TKCTGTTCCA
 A T G C A C G T G T C A T A C G A G T C A C G T T C G A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTAGCTATTC-
---GCTAATCC
 A T G C A C G T G T C A T A C G A G T C A C G T T C G A A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CTAGCTATTC--
-----TTTTCCA
 A T G C A C G T G T C A T A C G A G T C A C G T T C G A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

PH0035.1_Gsc/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTAGCTATTC------
AATCGTTAATCCCTTTA
 A C G T A T G C A C G T G T C A T A C G A G T C A C G T T C G A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTAGCTATTC-----
---KCTATTTTTRGH
 A T G C A C G T G T C A T A C G A G T C A C G T T C G A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTAGCTATTC---
---GCTAATCCCC
 A T G C A C G T G T C A T A C G A G T C A C G T T C G A A C G T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTAGCTATTC-----
---GCTATTTTTGGM
 A T G C A C G T G T C A T A C G A G T C A C G T T C G A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C