Information for 7-TTCAAAGTACCCTTGG (Motif 11)

A G C T A C G T G T A C C G T A C G T A C G T A A C T G A C G T C T G A A G T C G T A C A G T C C G A T A G C T A T C G C T A G
Reverse Opposite:
A G T C A T G C C T G A C G T A C T A G A C T G A C T G A G C T C G T A A G T C A C G T A C G T A C G T A C T G C G T A C T G A
p-value:1e-11
log p-value:-2.560e+01
Information Content per bp:1.827
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 18.2bp
Average Position of motif in Background34.8 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TTCAAAGTACCCTTGG
CANAGNNCAAAGTCCA-----
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T G T A C C G T A C G T A C G T A A C T G A C G T C T G A A G T C G T A C A G T C C G A T A G C T A T C G C T A G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TTCAAAGTACCCTTGG
AGAGTCCAAAGTCCA-----
 A C G T A C G T A C G T A C G T A G C T A C G T G T A C C G T A C G T A C G T A A C T G A C G T C T G A A G T C G T A C A G T C C G A T A G C T A T C G C T A G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTCAAAGTACCCTTGG
GGGGTCAAAGTCCAAT---
 A C G T A C G T A C G T A G C T A C G T G T A C C G T A C G T A C G T A A C T G A C G T C T G A A G T C G T A C A G T C C G A T A G C T A T C G C T A G
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T A C G T A C G T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTCAAAGTACCCTTGG-
TTCNAAGTACTTNNNNN
 A G C T A C G T G T A C C G T A C G T A C G T A A C T G A C G T C T G A A G T C G T A C A G T C C G A T A G C T A T C G C T A G A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTCAAAGTACCCTTGG
ACATCAAAGG--------
 A C G T A C G T A G C T A C G T G T A C C G T A C G T A C G T A A C T G A C G T C T G A A G T C G T A C A G T C C G A T A G C T A T C G C T A G
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TTCAAAGTACCCTTGG
TATAGATCAAAGGAAAA----
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T G T A C C G T A C G T A C G T A A C T G A C G T C T G A A G T C G T A C A G T C C G A T A G C T A T C G C T A G
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A A C G T A C G T A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TTCAAAGTACCCTTGG
TATAGATCAAAGGAAAA----
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T G T A C C G T A C G T A C G T A A C T G A C G T C T G A A G T C G T A C A G T C C G A T A G C T A T C G C T A G
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TTCAAAGTACCCTTGG
CGGTTTCAAA----------
 A C G T A C G T A C G T A C G T A G C T A C G T G T A C C G T A C G T A C G T A A C T G A C G T C T G A A G T C G T A C A G T C C G A T A G C T A T C G C T A G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TTCAAAGTACCCTTGG
AAAGATCAAAGGAA------
 A C G T A C G T A C G T A C G T A G C T A C G T G T A C C G T A C G T A C G T A A C T G A C G T C T G A A G T C G T A C A G T C C G A T A G C T A T C G C T A G
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TTCAAAGTACCCTTGG
NNNAGATCAAAGGANNN----
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T G T A C C G T A C G T A C G T A A C T G A C G T C T G A A G T C G T A C A G T C C G A T A G C T A T C G C T A G
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T A C G T A C G T A C G T A C G T