Information for 6-TCGTGCTGCCCTC (Motif 7)

A C G T A T G C A C T G A G C T A C T G A G T C A C G T A C T G A G T C A G T C A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A T C A G A C T G A C T G A G T C C G T A A C T G G T A C C T G A A G T C T A C G C G T A
p-value:1e-11
log p-value:-2.677e+01
Information Content per bp:1.912
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.6 +/- 28.7bp
Average Position of motif in Background55.7 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.64
Offset:5
Orientation:forward strand
Alignment:TCGTGCTGCCCTC-
-----CTGCCCGCA
 A C G T A T G C A C T G A G C T A C T G A G T C A C G T A C T G A G T C A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TCGTGCTGCCCTC-
------TGACCTYA
 A C G T A T G C A C T G A G C T A C T G A G T C A C G T A C T G A G T C A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCGTGCTGCCCTC--
WCATTTTGKCCTCYT
 A C G T A T G C A C T G A G C T A C T G A G T C A C G T A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCGTGCTGCCCTC
CNGTCCTCCC---
 A C G T A T G C A C T G A G C T A C T G A G T C A C G T A C T G A G T C A G T C A G T C A C G T A G T C
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TCGTGCTGCCCTC-
-----ATGCCCACC
 A C G T A T G C A C T G A G C T A C T G A G T C A C G T A C T G A G T C A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TCGTGCTGCCCTC--
-----CTGACCTTTG
 A C G T A T G C A C T G A G C T A C T G A G T C A C G T A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCGTGCTGCCCTC
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T A T G C A C T G A G C T A C T G A G T C A C G T A C T G A G T C A G T C A G T C A C G T A G T C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TCGTGCTGCCCTC-
------TGACCYCT
 A C G T A T G C A C T G A G C T A C T G A G T C A C G T A C T G A G T C A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

ESR2/MA0258.2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TCGTGCTGCCCTC
AGGNCANNGTGACCT-
 A C G T A C G T A C G T A C G T A T G C A C T G A G C T A C T G A G T C A C G T A C T G A G T C A G T C A G T C A C G T A G T C
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TCGTGCTGCCCTC-
--GCTCCGCCCMCY
 A C G T A T G C A C T G A G C T A C T G A G T C A C G T A C T G A G T C A G T C A G T C A C G T A G T C A C G T
A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T