Information for 3-TTAAATAAAAACA (Motif 3)

C G A T A G C T C T G A C G T A T G C A G C A T T C G A G T C A C G T A G C T A C G T A G T A C G C T A
Reverse Opposite:
C G A T C A T G A C G T C G A T C G A T C A G T A C G T C G T A A C G T G A C T G A C T T C G A C G T A
p-value:1e-41
log p-value:-9.663e+01
Information Content per bp:1.676
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif6.69%
Number of Background Sequences with motif218.1
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets57.1 +/- 24.4bp
Average Position of motif in Background48.2 +/- 37.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TTAAATAAAAACA---
-CAAACAACAACACCT
 C G A T A G C T C T G A C G T A T G C A G C A T T C G A G T C A C G T A G C T A C G T A G T A C G C T A A C G T A C G T A C G T
A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TTAAATAAAAACA-----
--ATATCAAAACAAAACA
 C G A T A G C T C T G A C G T A T G C A G C A T T C G A G T C A C G T A G C T A C G T A G T A C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

FOXP1/MA0481.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TTAAATAAAAACA---
-CAAAAGTAAACAAAG
 C G A T A G C T C T G A C G T A T G C A G C A T T C G A G T C A C G T A G C T A C G T A G T A C G C T A A C G T A C G T A C G T
A C G T G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:TTAAATAAAAACA
----AAATAAACA
 C G A T A G C T C T G A C G T A T G C A G C A T T C G A G T C A C G T A G C T A C G T A G T A C G C T A
A C G T A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

PB0121.1_Foxj3_2/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TTAAATAAAAACA-----
-AACACCAAAACAAAGGA
 C G A T A G C T C T G A C G T A T G C A G C A T T C G A G T C A C G T A G C T A C G T A G T A C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0182.1_Srf_2/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TTAAATAAAAACA---
GTTAAAAAAAAAAATTA
 A C G T C G A T A G C T C T G A C G T A T G C A G C A T T C G A G T C A C G T A G C T A C G T A G T A C G C T A A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:7
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TTAAATAAAAACA--
---WWTRTAAACAVG
 C G A T A G C T C T G A C G T A T G C A G C A T T C G A G T C A C G T A G C T A C G T A G T A C G C T A A C G T A C G T
A C G T A C G T A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

PB0019.1_Foxl1_1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTAAATAAAAACA-----
-TAAATGTAAACAAAGGT
 C G A T A G C T C T G A C G T A T G C A G C A T T C G A G T C A C G T A G C T A C G T A G T A C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:9
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TTAAATAAAAACA-
--WWATRTAAACAN
 C G A T A G C T C T G A C G T A T G C A G C A T T C G A G T C A C G T A G C T A C G T A G T A C G C T A A C G T
A C G T A C G T G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

FOXC2/MA0846.1/Jaspar

Match Rank:10
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TTAAATAAAAACA--
---TAAGTAAACAAA
 C G A T A G C T C T G A C G T A T G C A G C A T T C G A G T C A C G T A G C T A C G T A G T A C G C T A A C G T A C G T
A C G T A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A