Information for 10-GGCCATTGTGGTG (Motif 5)

A T C G A C T G A G T C A G T C T C G A A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A G T C G T C A A G T C C G T A C G T A A G C T A C T G A C T G A G T C A T G C
p-value:1e-10
log p-value:-2.496e+01
Information Content per bp:1.942
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.6 +/- 32.7bp
Average Position of motif in Background92.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGCCATTGTGGTG
--CCTTTGTT---
 A T C G A C T G A G T C A G T C T C G A A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C T G
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GGCCATTGTGGTG--
---NNHTGTGGTTWN
 A T C G A C T G A G T C A G T C T C G A A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGCCATTGTGGTG
--CCWTTGTY---
 A T C G A C T G A G T C A G T C T C G A A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C T G
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGCCATTGTGGTG
--CCATTGTTNY-
 A T C G A C T G A G T C A G T C T C G A A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C T G
A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGCCATTGTGGTG
--CCATTGTTYB-
 A T C G A C T G A G T C A G T C T C G A A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C T G
A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T

GFY(?)/Promoter/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGCCATTGTGGTG
GGGAATTGTAGT-
 A T C G A C T G A G T C A G T C T C G A A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C T G
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGCCATTGTGGTG
-CTCATTGTC---
 A T C G A C T G A G T C A G T C T C G A A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C T G
A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGCCATTGTGGTG
--CCWTTGTYYB-
 A T C G A C T G A G T C A G T C T C G A A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C T G
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GGCCATTGTGGTG--
-----CTGTGGTTTN
 A T C G A C T G A G T C A G T C T C G A A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

SOX10/MA0442.1/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GGCCATTGTGGTG
---CTTTGT----
 A T C G A C T G A G T C A G T C T C G A A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C T G
A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T