Information for 4-TGTGCWYGTGASM (Motif 9)

A C G T A C T G A C G T A T C G A T G C C G A T A G T C C T A G A G C T A T C G G T C A A T C G G T C A
Reverse Opposite:
A C G T A T G C C A G T A T G C C T G A A G T C T C A G C G T A A T C G T A G C C G T A A G T C T C G A
p-value:1e-10
log p-value:-2.487e+01
Information Content per bp:1.727
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif77.3
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets61.1 +/- 22.9bp
Average Position of motif in Background46.7 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGTGCWYGTGASM
CTGTTCCTGG----
 A C G T A C G T A C T G A C G T A T C G A T G C C G A T A G T C C T A G A G C T A T C G G T C A A T C G G T C A
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TGTGCWYGTGASM
---NCACGTGACN
 A C G T A C T G A C G T A T C G A T G C C G A T A G T C C T A G A G C T A T C G G T C A A T C G G T C A
A C G T A C G T A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TGTGCWYGTGASM
---KCACGTGMCN
 A C G T A C T G A C G T A T C G A T G C C G A T A G T C C T A G A G C T A T C G G T C A A T C G G T C A
A C G T A C G T A C G T C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGTGCWYGTGASM
--KCCACGTGAC-
 A C G T A C T G A C G T A T C G A T G C C G A T A G T C C T A G A G C T A T C G G T C A A T C G G T C A
A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------TGTGCWYGTGASM
NNNNTTGTGTGCTTNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A T C G A T G C C G A T A G T C C T A G A G C T A T C G G T C A A T C G G T C A
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGCWYGTGASM
NTNTATGTGCACATNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A T C G A T G C C G A T A G T C C T A G A G C T A T C G G T C A A T C G G T C A
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A A C G T

Mitf/MA0620.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGTGCWYGTGASM
---NCACGTGACN
 A C G T A C T G A C G T A T C G A T G C C G A T A G T C C T A G A G C T A T C G G T C A A T C G G T C A
A C G T A C G T A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGTGCWYGTGASM
NNHTGTGGTTWN----
 A C G T A C G T A C G T A C G T A C T G A C G T A T C G A T G C C G A T A G T C C T A G A G C T A T C G G T C A A T C G G T C A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGTGCWYGTGASM---
-GTTCTCGCGAGANCC
 A C G T A C T G A C G T A T C G A T G C C G A T A G T C C T A G A G C T A T C G G T C A A T C G G T C A A C G T A C G T A C G T
A C G T T A C G G A C T G A C T T G A C A G C T A G T C C A T G G T A C A C T G T C G A A C T G T C G A A C G T A G T C A T G C

PB0026.1_Gm397_1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TGTGCWYGTGASM
CAGATGTGCACATACGT
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A T C G A T G C C G A T A G T C C T A G A G C T A T C G G T C A A T C G G T C A
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T