Information for 4-AGDCAGCAGCCAATAG (Motif 4)

C G T A A T C G C A G T G T A C C G T A A C T G A T G C C G T A A C T G A T G C A G T C T G C A C G T A C G A T G C T A A C T G
Reverse Opposite:
T A G C C A G T C G T A C G A T A C G T C T A G A T C G A G T C A C G T A T C G A G T C C G A T A C T G G A C T A T G C C G A T
p-value:1e-13
log p-value:-3.205e+01
Information Content per bp:1.729
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 26.5bp
Average Position of motif in Background70.0 +/- 18.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGDCAGCAGCCAATAG
TGAGTCAGCA--------
 A C G T A C G T C G T A A T C G C A G T G T A C C G T A A C T G A T G C C G T A A C T G A T G C A G T C T G C A C G T A C G A T G C T A A C T G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGDCAGCAGCCAATAG
---CAGCTGNT-----
 C G T A A T C G C A G T G T A C C G T A A C T G A T G C C G T A A C T G A T G C A G T C T G C A C G T A C G A T G C T A A C T G
A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.57
Offset:6
Orientation:forward strand
Alignment:AGDCAGCAGCCAATAG
------CAGCC-----
 C G T A A T C G C A G T G T A C C G T A A C T G A T G C C G T A A C T G A T G C A G T C T G C A C G T A C G A T G C T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGDCAGCAGCCAATAG
CCACACAGCAGGAGA---
 A C G T A C G T C G T A A T C G C A G T G T A C C G T A A C T G A T G C C G T A A C T G A T G C A G T C T G C A C G T A C G A T G C T A A C T G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGDCAGCAGCCAATAG
ATTTACAGTAGCAAAA--
 A C G T A C G T C G T A A T C G C A G T G T A C C G T A A C T G A T G C C G T A A C T G A T G C A G T C T G C A C G T A C G A T G C T A A C T G
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGDCAGCAGCCAATAG
-AGCAGCTGCTNN---
 C G T A A T C G C A G T G T A C C G T A A C T G A T G C C G T A A C T G A T G C A G T C T G C A C G T A C G A T G C T A A C T G
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AGDCAGCAGCCAATAG
----AGCAGCTGCT--
 C G T A A T C G C A G T G T A C C G T A A C T G A T G C C G T A A C T G A T G C A G T C T G C A C G T A C G A T G C T A A C T G
A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGDCAGCAGCCAATAG
CCACACAGCAGGAGA---
 A C G T A C G T C G T A A T C G C A G T G T A C C G T A A C T G A T G C C G T A A C T G A T G C A G T C T G C A C G T A C G A T G C T A A C T G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGDCAGCAGCCAATAG
--NCAGCTGCTG----
 C G T A A T C G C A G T G T A C C G T A A C T G A T G C C G T A A C T G A T G C A G T C T G C A C G T A C G A T G C T A A C T G
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGDCAGCAGCCAATAG
-GACAGCTGCAG----
 C G T A A T C G C A G T G T A C C G T A A C T G A T G C C G T A A C T G A T G C A G T C T G C A C G T A C G A T G C T A A C T G
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T