Information for 13-ATCACAAAGAGMT (Motif 24)

C G T A G A C T G T A C C G T A A T G C C G T A C G T A C G T A A T C G G T C A A C T G G T A C A G C T
Reverse Opposite:
C T G A A C T G G T A C A C G T A T G C A C G T C G A T A C G T A T C G A C G T A C T G C G T A C G A T
p-value:1e-7
log p-value:-1.727e+01
Information Content per bp:1.786
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif12.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets55.9 +/- 25.4bp
Average Position of motif in Background44.8 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:ATCACAAAGAGMT
---ACAAAG----
 C G T A G A C T G T A C C G T A A T G C C G T A C G T A C G T A A T C G G T C A A C T G G T A C A G C T
A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:ATCACAAAGAGMT--
---ACAAAGGNBCCT
 C G T A G A C T G T A C C G T A A T G C C G T A C G T A C G T A A T C G G T C A A C T G G T A C A G C T A C G T A C G T
A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ATCACAAAGAGMT-
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T C G T A G A C T G T A C C G T A A T G C C G T A C G T A C G T A A T C G G T C A A C T G G T A C A G C T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATCACAAAGAGMT
VRRACAAWGG---
 C G T A G A C T G T A C C G T A A T G C C G T A C G T A C G T A A T C G G T C A A C T G G T A C A G C T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ATCACAAAGAGMT-
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T C G T A G A C T G T A C C G T A A T G C C G T A C G T A C G T A A T C G G T C A A C T G G T A C A G C T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATCACAAAGAGMT
AAAACAAAGG---
 C G T A G A C T G T A C C G T A A T G C C G T A C G T A C G T A A T C G G T C A A C T G G T A C A G C T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATCACAAAGAGMT
GGAACAAAGR---
 C G T A G A C T G T A C C G T A A T G C C G T A C G T A C G T A A T C G G T C A A C T G G T A C A G C T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATCACAAAGAGMT
AAACAGACAAAGGAAT
 A C G T A C G T A C G T C G T A G A C T G T A C C G T A A T G C C G T A C G T A C G T A A T C G G T C A A C T G G T A C A G C T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATCACAAAGAGMT
--RACAAWGG---
 C G T A G A C T G T A C C G T A A T G C C G T A C G T A C G T A A T C G G T C A A C T G G T A C A G C T
A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ATCACAAAGAGMT
--AACAAAGG---
 C G T A G A C T G T A C C G T A A T G C C G T A C G T A C G T A A T C G G T C A A C T G G T A C A G C T
A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T