Information for 12-CTYTYTTGTCMAA (Motif 23)

A T G C A G C T A G T C G C A T A G C T A C G T A C G T A C T G C G A T T G A C G T C A G T C A C T G A
Reverse Opposite:
A G C T C A G T A C G T A C T G G C T A T A G C T C G A C G T A C T G A C G T A C T A G T C G A T A C G
p-value:1e-7
log p-value:-1.729e+01
Information Content per bp:1.683
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif271.1
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets54.3 +/- 19.1bp
Average Position of motif in Background50.5 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CTYTYTTGTCMAA
-----YTGWCADY
 A T G C A G C T A G T C G C A T A G C T A C G T A C G T A C T G C G A T T G A C G T C A G T C A C T G A
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CTYTYTTGTCMAA
-----NTGTCAN-
 A T G C A G C T A G T C G C A T A G C T A C G T A C G T A C T G C G A T T G A C G T C A G T C A C T G A
A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CTYTYTTGTCMAA
----CCTGTCAA-
 A T G C A G C T A G T C G C A T A G C T A C G T A C G T A C T G C G A T T G A C G T C A G T C A C T G A
A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CTYTYTTGTCMAA
---NNTTGGCANN
 A T G C A G C T A G T C G C A T A G C T A C G T A C G T A C T G C G A T T G A C G T C A G T C A C T G A
A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTYTYTTGTCMAA--
ANTCCTTTGTCTNNNN
 A C G T A T G C A G C T A G T C G C A T A G C T A C G T A C G T A C T G C G A T T G A C G T C A G T C A C T G A A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTYTYTTGTCMAA-
---GCTCGTAAAAA
 A T G C A G C T A G T C G C A T A G C T A C G T A C G T A C T G C G A T T G A C G T C A G T C A C T G A A C G T
A C G T A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CTYTYTTGTCMAA-
------TGTCANYT
 A T G C A G C T A G T C G C A T A G C T A C G T A C G T A C T G C G A T T G A C G T C A G T C A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CTYTYTTGTCMAA
----CTTGGCAA-
 A T G C A G C T A G T C G C A T A G C T A C G T A C G T A C T G C G A T T G A C G T C A G T C A C T G A
A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTYTYTTGTCMAA-
---NATTGTGCAAT
 A T G C A G C T A G T C G C A T A G C T A C G T A C G T A C T G C G A T T G A C G T C A G T C A C T G A A C G T
A C G T A C G T A C G T C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTYTYTTGTCMAA
--CCWTTGTY---
 A T G C A G C T A G T C G C A T A G C T A C G T A C G T A C T G C G A T T G A C G T C A G T C A C T G A
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T