Information for 6-SCASTTMAGRCCC (Motif 13)

A T G C A G T C C G T A A T G C A G C T A G C T G T C A C G T A A C T G C T A G A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A G T C A G T C A C G T A C G T C T G A C T G A A T C G A C G T A C T G A T C G
p-value:1e-8
log p-value:-2.054e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.4 +/- 29.2bp
Average Position of motif in Background41.2 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-SCASTTMAGRCCC
ACCACTTGAA----
 A C G T A T G C A G T C C G T A A T G C A G C T A G C T G T C A C G T A A C T G C T A G A G T C A G T C A G T C
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-SCASTTMAGRCCC
ACCACTTAA-----
 A C G T A T G C A G T C C G T A A T G C A G C T A G C T G T C A C G T A A C T G C T A G A G T C A G T C A G T C
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-SCASTTMAGRCCC
ACCACTTAA-----
 A C G T A T G C A G T C C G T A A T G C A G C T A G C T G T C A C G T A A C T G C T A G A G T C A G T C A G T C
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----SCASTTMAGRCCC
CTTAACCACTTAAGGAT-
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A A T G C A G C T A G C T G T C A C G T A A C T G C T A G A G T C A G T C A G T C
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:SCASTTMAGRCCC
GCACTTAA-----
 A T G C A G T C C G T A A T G C A G C T A G C T G T C A C G T A A C T G C T A G A G T C A G T C A G T C
T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:SCASTTMAGRCCC
CCACTTGAA----
 A T G C A G T C C G T A A T G C A G C T A G C T G T C A C G T A A C T G C T A G A G T C A G T C A G T C
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-SCASTTMAGRCCC
RSCACTYRAG----
 A C G T A T G C A G T C C G T A A T G C A G C T A G C T G T C A C G T A A C T G C T A G A G T C A G T C A G T C
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-SCASTTMAGRCCC
NSCACTYVAV----
 A C G T A T G C A G T C C G T A A T G C A G C T A G C T G T C A C G T A A C T G C T A G A G T C A G T C A G T C
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----SCASTTMAGRCCC
CATAACCACTTAACAAC-
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A A T G C A G C T A G C T G T C A C G T A A C T G C T A G A G T C A G T C A G T C
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:10
Score:0.61
Offset:6
Orientation:forward strand
Alignment:SCASTTMAGRCCC---
------AAGACCCYYN
 A T G C A G T C C G T A A T G C A G C T A G C T G T C A C G T A A C T G C T A G A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C