Information for 8-CAGAGGCGGYCATGTA (Motif 16)

A G T C C G T A A C T G C G T A A C T G A C T G A G T C A C T G A C T G A G C T A G T C G C T A A C G T A C T G A C G T C G T A
Reverse Opposite:
C G A T C G T A A G T C C G T A C A G T A C T G C T A G A G T C A G T C A C T G A G T C A G T C A C G T A G T C C G A T A C T G
p-value:1e-9
log p-value:-2.168e+01
Information Content per bp:1.900
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.2 +/- 17.6bp
Average Position of motif in Background48.3 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0110.1_Bcl6b_2/Jaspar

Match Rank:1
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CAGAGGCGGYCATGTA
NNTNAGGGGCGGNNNN---
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G A C T G A G T C A C T G A C T G A G C T A G T C G C T A A C G T A C T G A C G T C G T A
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:2
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGGCGGYCATGTA
NNANTGGTGGTCTTNNN
 A C G T A G T C C G T A A C T G C G T A A C T G A C T G A G T C A C T G A C T G A G C T A G T C G C T A A C G T A C T G A C G T C G T A
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CAGAGGCGGYCATGTA-
-----GCCGCCATCTTG
 A G T C C G T A A C T G C G T A A C T G A C T G A G T C A C T G A C T G A G C T A G T C G C T A A C G T A C T G A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CAGAGGCGGYCATGTA-
-----GCNGCCATCTTG
 A G T C C G T A A C T G C G T A A C T G A C T G A G T C A C T G A C T G A G C T A G T C G C T A A C G T A C T G A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CAGAGGCGGYCATGTA
---AGGVNCCTTTGT-
 A G T C C G T A A C T G C G T A A C T G A C T G A G T C A C T G A C T G A G C T A G T C G C T A A C G T A C T G A C G T C G T A
A C G T A C G T A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T

SP2/MA0516.1/Jaspar

Match Rank:6
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CAGAGGCGGYCATGTA
GGGNGGGGGCGGGGC----
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G A C T G A G T C A C T G A C T G A G C T A G T C G C T A A C G T A C T G A C G T C G T A
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CAGAGGCGGYCATGTA
AGGGGGCGGGGCTG--
 A G T C C G T A A C T G C G T A A C T G A C T G A G T C A C T G A C T G A G C T A G T C G C T A A C G T A C T G A C G T C G T A
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CAGAGGCGGYCATGTA
NGCCTGAGGCN--------
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G A C T G A G T C A C T G A C T G A G C T A G T C G C T A A C G T A C T G A C G T C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---CAGAGGCGGYCATGTA
TGCCTGAGGCN--------
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G A C T G A G T C A C T G A C T G A G C T A G T C G C T A A C G T A C T G A C G T C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:10
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CAGAGGCGGYCATGTA
AGCCTCAGGCA--------
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G A C T G A G T C A C T G A C T G A G C T A G T C G C T A A C G T A C T G A C G T C G T A
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T