Information for 11-GGGAATGAGH (Motif 13)

C T A G A T C G C T A G C G T A C G T A G A C T C A T G C G T A A T C G G T C A
Reverse Opposite:
C A G T A T G C A C G T G T A C C T G A A C G T A C G T A G T C A T G C A G T C
p-value:1e-8
log p-value:-2.016e+01
Information Content per bp:1.769
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.29%
Number of Background Sequences with motif389.4
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets49.1 +/- 26.0bp
Average Position of motif in Background50.3 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEOX1/MA0661.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGGAATGAGH
GNTAATTAGN
 C T A G A T C G C T A G C G T A C G T A G A C T C A T G C G T A A T C G G T C A
A T C G C A G T G A C T T G C A C T G A G C A T A C G T C T G A A T C G A G T C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GGGAATGAGH
CSTGGGAAAD---
 A C G T A C G T A C G T C T A G A T C G C T A G C G T A C G T A G A C T C A T G C G T A A T C G G T C A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGGAATGAGH
NCTGGAATGC--
 A C G T A C G T C T A G A T C G C T A G C G T A C G T A G A C T C A T G C G T A A T C G G T C A
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T

PH0049.1_Hoxa2/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGGAATGAGH----
AAGGTAATTAGCTCAT
 A C G T A C G T C T A G A T C G C T A G C G T A C G T A G A C T C A T G C G T A A T C G G T C A A C G T A C G T A C G T A C G T
C T G A T G C A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A T A C G G A T C G A C T G T A C C G T A C G A T

PH0081.1_Pdx1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGGAATGAGH----
AAGGTAATTAGCTCAT
 A C G T A C G T C T A G A T C G C T A G C G T A C G T A G A C T C A T G C G T A A T C G G T C A A C G T A C G T A C G T A C G T
T G C A T G C A C T A G A T C G G A C T T G C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T T A G C C G T A C A G T

EMX2/MA0886.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGGAATGAGH
GCTAATTAGC
 C T A G A T C G C T A G C G T A C G T A G A C T C A T G C G T A A T C G G T C A
T C A G A T G C G A C T G T C A C G T A A C G T A C G T C G T A T C A G A T G C

EN1/MA0027.2/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGGAATGAGH
-CTAATTAG-
 C T A G A T C G C T A G C G T A C G T A G A C T C A T G C G T A A T C G G T C A
A C G T A T G C G A C T T G C A G T C A A C G T A G C T C G T A T C A G A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGGAATGAGH
CCWGGAATGY--
 A C G T A C G T C T A G A T C G C T A G C G T A C G T A G A C T C A T G C G T A A T C G G T C A
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T

PH0052.1_Hoxa5/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGGAATGAGH----
ACGGTAATTAGCTCAG
 A C G T A C G T C T A G A T C G C T A G C G T A C G T A G A C T C A T G C G T A A T C G G T C A A C G T A C G T A C G T A C G T
T C G A T G A C C T A G A C T G G A C T G T C A G T C A A C G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A C T A G

PH0024.1_Dlx5/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGGAATGAGH----
GGGGTAATTAGCTCTG
 A C G T A C G T C T A G A T C G C T A G C G T A C G T A G A C T C A T G C G T A A T C G G T C A A C G T A C G T A C G T A C G T
A T C G A T C G T C A G T C A G G A C T G T C A C G T A G A C T C A G T C T G A T A C G A G T C A C G T T G A C A C G T A T C G