Information for 2-GTTCCCAGGG (Motif 9)

A C T G A C G T G C A T A G T C A G T C G T A C C G T A A C T G C T A G A C T G
Reverse Opposite:
A G T C A G T C A G T C G C A T C A T G A C T G T C A G C G T A C G T A T G A C
p-value:1e-11
log p-value:-2.544e+01
Information Content per bp:1.738
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif6.08%
Number of Background Sequences with motif688.7
Percentage of Background Sequences with motif1.40%
Average Position of motif in Targets38.3 +/- 23.5bp
Average Position of motif in Background47.4 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GTTCCCAGGG--
GTCCCCAGGGGA
 A C T G A C G T G C A T A G T C A G T C G T A C C G T A A C T G C T A G A C T G A C G T A C G T
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GTTCCCAGGG-
NGTCCCNNGGGA
 A C G T A C T G A C G T G C A T A G T C A G T C G T A C C G T A A C T G C T A G A C T G A C G T
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GTTCCCAGGG
CTGTTGCTAGGS
 A C G T A C G T A C T G A C G T G C A T A G T C A G T C G T A C C G T A A C T G C T A G A C T G
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

Rfx1/MA0509.1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTTCCCAGGG----
GTTGCCATGGNAAC
 A C T G A C G T G C A T A G T C A G T C G T A C C G T A A C T G C T A G A C T G A C G T A C G T A C G T A C G T
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

EBF1/MA0154.3/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GTTCCCAGGG---
ANTCCCTNGGGAAT
 A C G T A C T G A C G T G C A T A G T C A G T C G T A C C G T A A C T G C T A G A C T G A C G T A C G T A C G T
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTTCCCAGGG---
NGTTGCCATGGCAA
 A C G T A C T G A C G T G C A T A G T C A G T C G T A C C G T A A C T G C T A G A C T G A C G T A C G T A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTTCCCAGGG
HTTTCCCASG-
 A C G T A C T G A C G T G C A T A G T C A G T C G T A C C G T A A C T G C T A G A C T G
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GTTCCCAGGG---
GGTTGCCATGGCAA
 A C G T A C T G A C G T G C A T A G T C A G T C G T A C C G T A A C T G C T A G A C T G A C G T A C G T A C G T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GTTCCCAGGG--
NNCGTTGCTATGGNN
 A C G T A C G T A C G T A C T G A C G T G C A T A G T C A G T C G T A C C G T A A C T G C T A G A C T G A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTTCCCAGGG-
-TGCCCAGNHW
 A C T G A C G T G C A T A G T C A G T C G T A C C G T A A C T G C T A G A C T G A C G T
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A