Information for 4-TGGCAAAVTGCTA (Motif 7)

A C G T A C T G A T C G A G T C C G T A C T G A C T G A T C A G A C G T C T A G A T G C A C G T C T G A
Reverse Opposite:
G A C T C G T A A T C G A G T C C G T A A G C T A G C T A G C T A C G T C T A G A T G C G T A C C G T A
p-value:1e-11
log p-value:-2.557e+01
Information Content per bp:1.798
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets72.7 +/- 10.5bp
Average Position of motif in Background39.1 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGGCAAAVTGCTA
TTGGCATGGTGCCA
 A C G T A C G T A C T G A T C G A G T C C G T A C T G A C T G A T C A G A C G T C T A G A T G C A C G T C T G A
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGGCAAAVTGCTA--
TTGGCANNNTGCCAAG
 A C G T A C G T A C T G A T C G A G T C C G T A C T G A C T G A T C A G A C G T C T A G A T G C A C G T C T G A A C G T A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAAAVTGCTA
CTTGGCAA-------
 A C G T A C G T A C G T A C T G A T C G A G T C C G T A C T G A C T G A T C A G A C G T C T A G A T G C A C G T C T G A
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGGCAAAVTGCTA
CTGGCAGNCTGCCA
 A C G T A C G T A C T G A T C G A G T C C G T A C T G A C T G A T C A G A C G T C T A G A T G C A C G T C T G A
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGGCAAAVTGCTA
GGTGCCAAGT-----
 A C G T A C G T A C G T A C T G A T C G A G T C C G T A C T G A C T G A T C A G A C G T C T A G A T G C A C G T C T G A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAAAVTGCTA
NTTGGCANN------
 A C G T A C G T A C G T A C T G A T C G A G T C C G T A C T G A C T G A T C A G A C G T C T A G A T G C A C G T C T G A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAAAVTGCTA
NATGGAAAAN-----
 A C G T A C G T A C G T A C T G A T C G A G T C C G T A C T G A C T G A T C A G A C G T C T A G A T G C A C G T C T G A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGGCAAAVTGCTA
TTGGCA--------
 A C G T A C G T A C T G A T C G A G T C C G T A C T G A C T G A T C A G A C G T C T A G A T G C A C G T C T G A
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TGGCAAAVTGCTA
CAATTGCAAAAATAT-
 A C G T A C G T A C G T A C G T A C T G A T C G A G T C C G T A C T G A C T G A T C A G A C G T C T A G A T G C A C G T C T G A
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGGCAAAVTGCTA
TGGAAAA------
 A C G T A C T G A T C G A G T C C G T A C T G A C T G A T C A G A C G T C T A G A T G C A C G T C T G A
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T