Information for 9-ACACAHACATACAGVC (Motif 24)

C T G A G T A C C T G A G T A C C T G A G A T C C G T A G T A C C T G A A G C T C G T A A G T C C G T A T A C G T G C A T G A C
Reverse Opposite:
A C T G A C G T A T G C C G A T T C A G A C G T C T G A A G C T A C T G A C G T C T A G A G C T A C T G A G C T A C T G A G C T
p-value:1e-6
log p-value:-1.596e+01
Information Content per bp:1.755
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif95.8
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets57.5 +/- 27.9bp
Average Position of motif in Background50.2 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACACAHACATACAGVC
AAACAAACATTC----
 C T G A G T A C C T G A G T A C C T G A G A T C C G T A G T A C C T G A A G C T C G T A A G T C C G T A T A C G T G C A T G A C
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ACACAHACATACAGVC
--AAATAAACA-----
 C T G A G T A C C T G A G T A C C T G A G A T C C G T A G T A C C T G A A G C T C G T A A G T C C G T A T A C G T G C A T G A C
A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ACACAHACATACAGVC--
--AAACAGACAAAGGAAT
 C T G A G T A C C T G A G T A C C T G A G A T C C G T A G T A C C T G A A G C T C G T A A G T C C G T A T A C G T G C A T G A C A C G T A C G T
A C G T A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ACACAHACATACAGVC
AGCGGCACACACGCAA----
 A C G T A C G T A C G T A C G T C T G A G T A C C T G A G T A C C T G A G A T C C G T A G T A C C T G A A G C T C G T A A G T C C G T A T A C G T G C A T G A C
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ACACAHACATACAGVC
CAAAAGTAAACAAAG--
 A C G T C T G A G T A C C T G A G T A C C T G A G A T C C G T A G T A C C T G A A G C T C G T A A G T C C G T A T A C G T G C A T G A C
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ACACAHACATACAGVC
CGAAGCACACAAAATA----
 A C G T A C G T A C G T A C G T C T G A G T A C C T G A G T A C C T G A G A T C C G T A G T A C C T G A A G C T C G T A A G T C C G T A T A C G T G C A T G A C
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T A C G T A C G T

POL007.1_BREd/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ACACAHACATACAGVC
-NANANAC--------
 C T G A G T A C C T G A G T A C C T G A G A T C C G T A G T A C C T G A A G C T C G T A A G T C C G T A T A C G T G C A T G A C
A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ACACAHACATACAGVC
AAAAAGTAAACAAACAC
 A C G T C T G A G T A C C T G A G T A C C T G A G A T C C G T A G T A C C T G A A G C T C G T A A G T C C G T A T A C G T G C A T G A C
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ACACAHACATACAGVC
AAAAAGTAAACAAACAC
 A C G T C T G A G T A C C T G A G T A C C T G A G A T C C G T A G T A C C T G A A G C T C G T A A G T C C G T A T A C G T G C A T G A C
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0170.1_Sox17_2/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--ACACAHACATACAGVC
GACCACATTCATACAAT-
 A C G T A C G T C T G A G T A C C T G A G T A C C T G A G A T C C G T A G T A C C T G A A G C T C G T A A G T C C G T A T A C G T G C A T G A C
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T A C G T