Information for 7-CAGACTGACAGGCACT (Motif 16)

A G T C C G T A A C T G C G T A A G T C C G A T A C T G C G T A A G T C C G T A A C T G A T C G A G T C C G T A A G T C A G C T
Reverse Opposite:
C T G A A C T G A C G T A C T G A T G C A G T C A C G T A C T G A C G T A G T C C G T A A C T G C G A T A G T C A C G T A C T G
p-value:1e-9
log p-value:-2.136e+01
Information Content per bp:1.910
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.2 +/- 27.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CAGACTGACAGGCACT
-TGAGTGACAGSC---
 A G T C C G T A A C T G C G T A A G T C C G A T A C T G C G T A A G T C C G T A A C T G A T C G A G T C C G T A A G T C A G C T
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CAGACTGACAGGCACT-
-NNATTGACAGGTGCTT
 A G T C C G T A A C T G C G T A A G T C C G A T A C T G C G T A A G T C C G T A A C T G A T C G A G T C C G T A A G T C A G C T A C G T
A C G T T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAGACTGACAGGCACT
NTGATTGACAGN----
 A G T C C G T A A C T G C G T A A G T C C G A T A C T G C G T A A G T C C G T A A C T G A T C G A G T C C G T A A G T C A G C T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CAGACTGACAGGCACT
----TTGACAGC----
 A G T C C G T A A C T G C G T A A G T C C G A T A C T G C G T A A G T C C G T A A C T G A T C G A G T C C G T A A G T C A G C T
A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CAGACTGACAGGCACT
---VBTGWCAGCB---
 A G T C C G T A A C T G C G T A A G T C C G A T A C T G C G T A A G T C C G T A A C T G A T C G A G T C C G T A A G T C A G C T
A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAGACTGACAGGCACT-
GATATTGACAGCTGCGT
 A G T C C G T A A C T G C G T A A G T C C G A T A C T G C G T A A G T C C G T A A C T G A T C G A G T C C G T A A G T C A G C T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAGACTGACAGGCACT
BTGABTGACAGS----
 A G T C C G T A A C T G C G T A A G T C C G A T A C T G C G T A A G T C C G T A A C T G A T C G A G T C C G T A A G T C A G C T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CAGACTGACAGGCACT
----TTGACAG-----
 A G T C C G T A A C T G C G T A A G T C C G A T A C T G C G T A A G T C C G T A A C T G A T C G A G T C C G T A A G T C A G C T
A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAGACTGACAGGCACT-
-GTATTGACAGGTNNTT
 A G T C C G T A A C T G C G T A A G T C C G A T A C T G C G T A A G T C C G T A A C T G A T C G A G T C C G T A A G T C A G C T A C G T
A C G T C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CAGACTGACAGGCACT
----TTGACAGG----
 A G T C C G T A A C T G C G T A A G T C C G A T A C T G C G T A A G T C C G T A A C T G A T C G A G T C C G T A A G T C A G C T
A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T