Information for 5-CTACAMAATACAAMCT (Motif 12)

A G T C G C A T G C T A G T A C G C T A G T A C G C T A G C T A G C A T C T G A A G T C G T C A T C G A T G C A G A T C A C G T
Reverse Opposite:
G T C A C T A G A C G T A G C T A C G T C T A G A G C T C G T A C G A T C G A T C A T G C G A T C A T G C G A T C G T A C T A G
p-value:1e-10
log p-value:-2.384e+01
Information Content per bp:1.601
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif3.42%
Number of Background Sequences with motif215.5
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets54.2 +/- 21.7bp
Average Position of motif in Background49.0 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CTACAMAATACAAMCT
-----ATATGCAAAT-
 A G T C G C A T G C T A G T A C G C T A G T A C G C T A G C T A G C A T C T G A A G T C G T C A T C G A T G C A G A T C A C G T
A C G T A C G T A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CTACAMAATACAAMCT--
-----ATATGCAAATNNN
 A G T C G C A T G C T A G T A C G C T A G T A C G C T A G C T A G C A T C T G A A G T C G T C A T C G A T G C A G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CTACAMAATACAAMCT
-----TTATGCAAAT-
 A G T C G C A T G C T A G T A C G C T A G T A C G C T A G C T A G C A T C T G A A G T C G T C A T C G A T G C A G A T C A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:4
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CTACAMAATACAAMCT---
---TTGTATGCAAATTAGA
 A G T C G C A T G C T A G T A C G C T A G T A C G C T A G C T A G C A T C T G A A G T C G T C A T C G A T G C A G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

PB0161.1_Rxra_2/Jaspar

Match Rank:5
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CTACAMAATACAAMCT------
------NNNNCAACCTTCGNGA
 A G T C G C A T G C T A G T A C G C T A G T A C G C T A G C T A G C A T C T G A A G T C G T C A T C G A T G C A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A

Nr2e3/MA0164.1/Jaspar

Match Rank:6
Score:0.50
Offset:10
Orientation:forward strand
Alignment:CTACAMAATACAAMCT-
----------CAAGCTT
 A G T C G C A T G C T A G T A C G C T A G T A C G C T A G C T A G C A T C T G A A G T C G T C A T C G A T G C A G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:7
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CTACAMAATACAAMCT
----AATATGCAAATT
 A G T C G C A T G C T A G T A C G C T A G T A C G C T A G C T A G C A T C T G A A G T C G T C A T C G A T G C A G A T C A C G T
A C G T A C G T A C G T A C G T G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CTACAMAATACAAMCT
---TCCAATCCACA--
 A G T C G C A T G C T A G T A C G C T A G T A C G C T A G C T A G C A T C T G A A G T C G T C A T C G A T G C A G A T C A C G T
A C G T A C G T A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CTACAMAATACAAMCT
ATGCATAATTCA----
 A G T C G C A T G C T A G T A C G C T A G T A C G C T A G C T A G C A T C T G A A G T C G T C A T C G A T G C A G A T C A C G T
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A A C G T A C G T A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:10
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:CTACAMAATACAAMCT--
-TNNATTATGCATANNTT
 A G T C G C A T G C T A G T A C G C T A G T A C G C T A G C T A G C A T C T G A A G T C G T C A T C G A T G C A G A T C A C G T A C G T A C G T
A C G T G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T