Information for 3-KAKGGCAGCMMAG (Motif 6)

A C T G C G T A A C G T A C T G A C T G A T G C C G T A C A T G A G T C G T A C G T A C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C T G A C T G G A T C A C G T A T C G A G T C A G T C G T C A A C G T G T A C
p-value:1e-10
log p-value:-2.312e+01
Information Content per bp:1.869
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.7 +/- 19.1bp
Average Position of motif in Background46.2 +/- 9.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-KAKGGCAGCMMAG
TNNGGGCAG-----
 A C G T A C T G C G T A A C G T A C T G A C T G A T G C C G T A C A T G A G T C G T A C G T A C C G T A A C T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---KAKGGCAGCMMAG
CAAGATGGCGGC----
 A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A T G C C G T A C A T G A G T C G T A C G T A C C G T A A C T G
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---KAKGGCAGCMMAG
CAAGATGGCGGC----
 A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A T G C C G T A C A T G A G T C G T A C G T A C C G T A A C T G
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:KAKGGCAGCMMAG
-----CAGCC---
 A C T G C G T A A C G T A C T G A C T G A T G C C G T A C A T G A G T C G T A C G T A C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

PAX5/MA0014.2/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:KAKGGCAGCMMAG------
GAGGGCAGCCAAGCGTGAC
 A C T G C G T A A C G T A C T G A C T G A T G C C G T A C A T G A G T C G T A C G T A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T C A G C G T A T C A G C T A G A C T G G A T C C T G A T A C G A G T C T A G C T C G A C T G A A T C G A G T C C T A G C A G T C T A G C T G A G T A C

PB0041.1_Mafb_1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--KAKGGCAGCMMAG--
NCTANGTCAGCAAATTT
 A C G T A C G T A C T G C G T A A C G T A C T G A C T G A T G C C G T A C A T G A G T C G T A C G T A C C G T A A C T G A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---KAKGGCAGCMMAG
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A T G C C G T A C A T G A G T C G T A C G T A C C G T A A C T G
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:KAKGGCAGCMMAG---
------TGCCCAGNHW
 A C T G C G T A A C G T A C T G A C T G A T G C C G T A C A T G A G T C G T A C G T A C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--KAKGGCAGCMMAG-
ACTATGCCAACCTACC
 A C G T A C G T A C T G C G T A A C G T A C T G A C T G A T G C C G T A C A T G A G T C G T A C G T A C C G T A A C T G A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-KAKGGCAGCMMAG
NGTGGGCAT-----
 A C G T A C T G C G T A A C G T A C T G A C T G A T G C C G T A C A T G A G T C G T A C G T A C C G T A A C T G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T