Information for 7-GCGGCTCAAGGTT (Motif 10)

A C T G A G T C A C T G A C T G A G T C A C G T T A G C C G T A C T G A C T A G A C T G A C G T A G C T
Reverse Opposite:
C T G A C G T A A G T C A G T C A G C T A C G T A C T G C G T A A C T G A G T C A G T C A C T G A G T C
p-value:1e-9
log p-value:-2.201e+01
Information Content per bp:1.845
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.6 +/- 25.4bp
Average Position of motif in Background65.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCGGCTCAAGGTT-
--AGGTCAAGGTCA
 A C T G A G T C A C T G A C T G A G T C A C G T T A G C C G T A C T G A C T A G A C T G A C G T A G C T A C G T
A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCGGCTCAAGGTT-
--AGGTCAAGGTCA
 A C T G A G T C A C T G A C T G A G T C A C G T T A G C C G T A C T G A C T A G A C T G A C G T A G C T A C G T
A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

Esrrg/MA0643.1/Jaspar

Match Rank:3
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GCGGCTCAAGGTT--
-----TCAAGGTCAT
 A C T G A G T C A C T G A C T G A G T C A C G T T A G C C G T A C T G A C T A G A C T G A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

ESRRB/MA0141.3/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GCGGCTCAAGGTT---
-----TCAAGGTCATA
 A C T G A G T C A C T G A C T G A G T C A C G T T A G C C G T A C T G A C T A G A C T G A C G T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCGGCTCAAGGTT---
-AAGTTCAAGGTCAGC
 A C T G A G T C A C T G A C T G A G T C A C G T T A G C C G T A C T G A C T A G A C T G A C G T A G C T A C G T A C G T A C G T
A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

RHOXF1/MA0719.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCGGCTCAAGGTT
-NGGATTAN----
 A C T G A G T C A C T G A C T G A G T C A C G T T A G C C G T A C T G A C T A G A C T G A C G T A G C T
A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GCGGCTCAAGGTT-
----BTCAAGGTCA
 A C T G A G T C A C T G A C T G A G T C A C G T T A G C C G T A C T G A C T A G A C T G A C G T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

Hnf4a/MA0114.3/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCGGCTCAAGGTT----
-GGGGTCAAAGTCCAAT
 A C T G A G T C A C T G A C T G A G T C A C G T T A G C C G T A C T G A C T A G A C T G A C G T A G C T A C G T A C G T A C G T A C G T
A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GCGGCTCAAGGTT--
-----TCAAGGTCAN
 A C T G A G T C A C T G A C T G A G T C A C G T T A G C C G T A C T G A C T A G A C T G A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GCGGCTCAAGGTT-
----NTCAAGGTCA
 A C T G A G T C A C T G A C T G A G T C A C G T T A G C C G T A C T G A C T A G A C T G A C G T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A