Information for 5-CACWAGGGGG (Motif 5)

T G A C C G T A T A G C G C A T C G T A A C T G C T A G C T A G T A C G T C A G
Reverse Opposite:
A G T C A T G C G A T C G A T C T G A C G C A T C G T A A T C G G C A T A C T G
p-value:1e-10
log p-value:-2.385e+01
Information Content per bp:1.587
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.19%
Number of Background Sequences with motif122.2
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets47.7 +/- 31.0bp
Average Position of motif in Background45.0 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--CACWAGGGGG--------
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T T G A C C G T A T A G C G C A T C G T A A C T G C T A G C T A G T A C G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----CACWAGGGGG-----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T T G A C C G T A T A G C G C A T C G T A A C T G C T A G C T A G T A C G T C A G A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----CACWAGGGGG------
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T T G A C C G T A T A G C G C A T C G T A A C T G C T A G C T A G T A C G T C A G A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CACWAGGGGG--
NCNCAGCGGGGGGTC
 A C G T A C G T A C G T T G A C C G T A T A G C G C A T C G T A A C T G C T A G C T A G T A C G T C A G A C G T A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

ZIC1/MA0696.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CACWAGGGGG--
CACAGCGGGGGGTC
 A C G T A C G T T G A C C G T A T A G C G C A T C G T A A C T G C T A G C T A G T A C G T C A G A C G T A C G T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CACWAGGGGG--
NCGCAGCGGGGGGTC
 A C G T A C G T A C G T T G A C C G T A T A G C G C A T C G T A A C T G C T A G C T A G T A C G T C A G A C G T A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CACWAGGGGG
CACAGCAGGGGG
 A C G T A C G T T G A C C G T A T A G C G C A T C G T A A C T G C T A G C T A G T A C G T C A G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0100.1_Zfp740_1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CACWAGGGGG------
NANNTGGGGGGGGNGN
 T G A C C G T A T A G C G C A T C G T A A C T G C T A G C T A G T A C G T C A G A C G T A C G T A C G T A C G T A C G T A C G T
T A G C C T G A C G T A C A T G C A G T C A T G C A T G C A T G C A T G C A T G C A T G A C T G A C T G C T A G A T C G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CACWAGGGGG--
DCHCAGCAGGRGGCC
 A C G T A C G T A C G T T G A C C G T A T A G C G C A T C G T A A C T G C T A G C T A G T A C G T C A G A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CACWAGGGGG--
--GGAGGGGGAA
 T G A C C G T A T A G C G C A T C G T A A C T G C T A G C T A G T A C G T C A G A C G T A C G T
A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A