Information for 8-AATTAAATTC (Motif 9)

T G C A C G T A G A C T C G A T G C T A T G C A C G T A C G A T G C A T A G T C
Reverse Opposite:
C T A G C G T A G C T A G C A T A C G T C G A T G C T A C T G A G C A T A C G T
p-value:1e-10
log p-value:-2.500e+01
Information Content per bp:1.688
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif4.87%
Number of Background Sequences with motif681.7
Percentage of Background Sequences with motif1.45%
Average Position of motif in Targets49.6 +/- 26.3bp
Average Position of motif in Background50.3 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PROP1/MA0715.1/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-AATTAAATTC
TAATTAAATTA
 A C G T T G C A C G T A G A C T C G A T G C T A T G C A C G T A C G A T G C A T A G T C
G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A

Arid3b/MA0601.1/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--AATTAAATTC
NTAATTAATAT-
 A C G T A C G T T G C A C G T A G A C T C G A T G C T A T G C A C G T A C G A T G C A T A G T C
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AATTAAATTC
TAATTAAATTA
 A C G T T G C A C G T A G A C T C G A T G C T A T G C A C G T A C G A T G C A T A G T C
G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A

PH0101.1_Lmx1b/Jaspar

Match Rank:4
Score:0.72
Offset:-6
Orientation:reverse strand
Alignment:------AATTAAATTC-
NNAATTAATTAAAAANN
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A G A C T C G A T G C T A T G C A C G T A C G A T G C A T A G T C A C G T
T G A C C T G A G C T A C G T A A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G T A G C T A G C T A G A T C A G C T

GSX2/MA0893.1/Jaspar

Match Rank:5
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AATTAAATTC
ACTAATTAAA---
 A C G T A C G T A C G T T G C A C G T A G A C T C G A T G C T A T G C A C G T A C G A T G C A T A G T C
G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:6
Score:0.72
Offset:1
Orientation:forward strand
Alignment:AATTAAATTC
-ATTAAA---
 T G C A C G T A G A C T C G A T G C T A T G C A C G T A C G A T G C A T A G T C
A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:7
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AATTAAATTC
TAATTAAATTA
 A C G T T G C A C G T A G A C T C G A T G C T A T G C A C G T A C G A T G C A T A G T C
G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A

PH0095.1_Lhx5/Jaspar

Match Rank:8
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------AATTAAATTC-
CGAATTAATTAAATACT
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A G A C T C G A T G C T A T G C A C G T A C G A T G C A T A G T C A C G T
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T

PB0169.1_Sox15_2/Jaspar

Match Rank:9
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---AATTAAATTC--
TNGAATTTCATTNAN
 A C G T A C G T A C G T T G C A C G T A G A C T C G A T G C T A T G C A C G T A C G A T G C A T A G T C A C G T A C G T
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

PH0100.1_Lmx1a/Jaspar

Match Rank:10
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------AATTAAATTC-
CGAATTAATTAAAAACC
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A G A C T C G A T G C T A T G C A C G T A C G A T G C A T A G T C A C G T
T A G C T A C G G C T A C G T A G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G T A G C T A G C T A G A T C A G T C