Information for 10-CGGCCTCCTTTGT (Motif 7)

A G T C C A T G A C T G A G T C A G T C C G A T T A G C G A T C A C G T C A G T A G C T A C T G A C G T
Reverse Opposite:
G T C A A G T C C T G A G C T A C G T A C A T G A C T G C G T A A C T G C T A G A G T C G A T C C T A G
p-value:1e-11
log p-value:-2.648e+01
Information Content per bp:1.798
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif12.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets41.6 +/- 20.0bp
Average Position of motif in Background51.0 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.62
Offset:6
Orientation:forward strand
Alignment:CGGCCTCCTTTGT---
------CCTTTGTTTT
 A G T C C A T G A C T G A G T C A G T C C G A T T A G C G A T C A C G T C A G T A G C T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CGGCCTCCTTTGT-
------CCTTTGTT
 A G T C C A T G A C T G A G T C A G T C C G A T T A G C G A T C A C G T C A G T A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CGGCCTCCTTTGT-
------CCWTTGTY
 A G T C C A T G A C T G A G T C A G T C C G A T T A G C G A T C A C G T C A G T A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGGCCTCCTTTGT
-AGGVNCCTTTGT
 A G T C C A T G A C T G A G T C A G T C C G A T T A G C G A T C A C G T C A G T A G C T A C T G A C G T
A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CGGCCTCCTTTGT---
------CCWTTGTYYB
 A G T C C A T G A C T G A G T C A G T C C G A T T A G C G A T C A C G T C A G T A G C T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.59
Offset:7
Orientation:forward strand
Alignment:CGGCCTCCTTTGT
-------CTTTGT
 A G T C C A T G A C T G A G T C A G T C C G A T T A G C G A T C A C G T C A G T A G C T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CGGCCTCCTTTGT---
------YCTTTGTTCC
 A G T C C A T G A C T G A G T C A G T C C G A T T A G C G A T C A C G T C A G T A G C T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGGCCTCCTTTGT
AGGCCTAG-----
 A G T C C A T G A C T G A G T C A G T C C G A T T A G C G A T C A C G T C A G T A G C T A C T G A C G T
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGGCCTCCTTTGT------
--NNNTCCTTTGTTCTNNN
 A G T C C A T G A C T G A G T C A G T C C G A T T A G C G A T C A C G T C A G T A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CGGCCTCCTTTGT------
---ANTCCTTTGTCTNNNN
 A G T C C A T G A C T G A G T C A G T C C G A T T A G C G A T C A C G T C A G T A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T