Information for 6-AATTTCAGAA (Motif 5)

G T C A C T G A C A G T A C G T G C A T A T G C G C T A T C A G C G T A C G T A
Reverse Opposite:
G C A T G C A T A G T C C G A T T A C G C G T A T G C A G T C A A G C T A C G T
p-value:1e-12
log p-value:-2.954e+01
Information Content per bp:1.648
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif9.06%
Number of Background Sequences with motif1700.6
Percentage of Background Sequences with motif3.61%
Average Position of motif in Targets51.0 +/- 26.9bp
Average Position of motif in Background50.2 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBPA/MA0102.3/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:AATTTCAGAA--
-ATTGCACAATA
 G T C A C T G A C A G T A C G T G C A T A T G C G C T A T C A G C G T A C G T A A C G T A C G T
A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

HOXA5/MA0158.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AATTTCAGAA
AATTAGTG--
 G T C A C T G A C A G T A C G T G C A T A T G C G C T A T C A G C G T A C G T A
T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AATTTCAGAA
-ATTGCATAA
 G T C A C T G A C A G T A C G T G C A T A T G C G C T A T C A G C G T A C G T A
A C G T T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A

PB0169.1_Sox15_2/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AATTTCAGAA--
TNGAATTTCATTNAN
 A C G T A C G T A C G T G T C A C T G A C A G T A C G T G C A T A T G C G C T A T C A G C G T A C G T A A C G T A C G T
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AATTTCAGAA----
CAATTGCAAAAATAT
 A C G T G T C A C T G A C A G T A C G T G C A T A T G C G C T A T C A G C G T A C G T A A C G T A C G T A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

PB0162.1_Sfpi1_2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AATTTCAGAA--
CAAATTCCGGAACC
 A C G T A C G T G T C A C T G A C A G T A C G T G C A T A T G C G C T A T C A G C G T A C G T A A C G T A C G T
G T A C G C T A C T G A G C T A G C A T C G A T G T A C T G A C T C A G T C A G C G T A G C T A G T A C G T A C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AATTTCAGAA
TGGTTTCAGT-
 A C G T G T C A C T G A C A G T A C G T G C A T A T G C G C T A T C A G C G T A C G T A
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AATTTCAGAA
GCATTCCAGN-
 A C G T G T C A C T G A C A G T A C G T G C A T A T G C G C T A T C A G C G T A C G T A
C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AATTTCAGAA
CGGTTTCAAA-
 A C G T G T C A C T G A C A G T A C G T G C A T A T G C G C T A T C A G C G T A C G T A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AATTTCAGAA-
-VTTRCATAAY
 G T C A C T G A C A G T A C G T G C A T A T G C G C T A T C A G C G T A C G T A A C G T
A C G T T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C