Information for 8-TGTTGAGMTACAT (Motif 4)

A C G T A C T G A C G T C G A T A C T G C G T A A C T G T G A C A C G T C T G A A G T C C G T A A G C T
Reverse Opposite:
C T G A G A C T A C T G A G C T T C G A A C T G A G T C A C G T A G T C C G T A C G T A A G T C G T C A
p-value:1e-13
log p-value:-3.157e+01
Information Content per bp:1.820
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.6 +/- 27.5bp
Average Position of motif in Background27.4 +/- 5.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTGAGMTACAT
NNCTTTGTTTTGNTNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G A T A C T G C G T A A C T G T G A C A C G T C T G A A G T C C G T A A G C T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGTTGAGMTACAT
TTGTTTAC------
 A C G T A C G T A C T G A C G T C G A T A C T G C G T A A C T G T G A C A C G T C T G A A G T C C G T A A G C T
C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGTTGAGMTACAT
CNTGTTTACATA---
 A C G T A C G T A C G T A C T G A C G T C G A T A C T G C G T A A C T G T G A C A C G T C T G A A G T C C G T A A G C T
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGTTGAGMTACAT
TTTGTTTACTTA---
 A C G T A C G T A C G T A C T G A C G T C G A T A C T G C G T A A C T G T G A C A C G T C T G A A G T C C G T A A G C T
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TGTTGAGMTACAT
GTNTTGTTGTGANNT--
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G A T A C T G C G T A A C T G T G A C A C G T C T G A A G T C C G T A A G C T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TGTTGAGMTACAT---
--TTGACCTANTTATN
 A C G T A C T G A C G T C G A T A C T G C G T A A C T G T G A C A C G T C T G A A G T C C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGTTGAGMTACAT
HTGCTGAGTCAT--
 A C G T A C G T A C T G A C G T C G A T A C T G C G T A A C T G T G A C A C G T C T G A A G T C C G T A A G C T
G T C A G C A T A C T G G T A C G A C T A C T G G C T A A T C G C A G T G T A C C G T A A G C T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGTTGAGMTACAT
ATATTTACATA---
 A C G T A C G T A C T G A C G T C G A T A C T G C G T A A C T G T G A C A C G T C T G A A G T C C G T A A G C T
C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T A C G T A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGTTGAGMTACAT
SCHTGTTTACAT----
 A C G T A C G T A C G T A C G T A C T G A C G T C G A T A C T G C G T A A C T G T G A C A C G T C T G A A G T C C G T A A G C T
T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T A C G T A C G T A C G T A C G T

FOXO4/MA0848.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGTTGAGMTACAT
TGTTTAC------
 A C G T A C T G A C G T C G A T A C T G C G T A A C T G T G A C A C G T C T G A A G T C C G T A A G C T
C G A T C T A G G A C T C A G T A C G T G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T