Information for 12-TGAGAATGAT (Motif 16)

A C G T A C T G C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A A C G T A C G T A G T C A C G T A G T C C G T A
p-value:1e-5
log p-value:-1.273e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.0 +/- 23.4bp
Average Position of motif in Background63.8 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGAGAATGAT
-GACAATGNN
 A C G T A C T G C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C G T
A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGAGAATGAT
GNNACCGAGAATNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGAGAATGAT
CSTGGGAAAD--
 A C G T A C G T A C G T A C T G C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C G T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TGAGAATGAT-
----AATAATT
 A C G T A C T G C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T

POL002.1_INR/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGAGAATGAT
-NNNANTGA-
 A C G T A C T G C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C G T
A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGAGAATGAT--
NNNTAACAATTATAN
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PBX1/MA0070.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGAGAATGAT--
TTTGATTGATGN
 A C G T A C T G C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TGAGAATGAT
----CATGAC
 A C G T A C T G C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGAGAATGAT----
GGAGAAAGGTGCGA
 A C G T A C T G C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PH0134.1_Pbx1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGAGAATGAT------
NNNNNATTGATGNGTGN
 A C G T A C G T A C T G C G T A A C T G C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A