Information for 13-GCAGTGDCATCTH (Motif 15)

A C T G A G T C C G T A C T A G A C G T A C T G C G T A A G T C G T C A A C G T A G T C A C G T G C T A
Reverse Opposite:
C A G T C G T A A C T G C G T A C A G T A C T G G A C T A G T C C G T A A G T C A C G T A C T G A G T C
p-value:1e-8
log p-value:-1.882e+01
Information Content per bp:1.852
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif20.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets36.4 +/- 15.8bp
Average Position of motif in Background49.1 +/- 45.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCAGTGDCATCTH-
AGAAATGACTTCCCT
 A C G T A C T G A G T C C G T A C T A G A C G T A C T G C G T A A G T C G T C A A C G T A G T C A C G T G C T A A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------GCAGTGDCATCTH
NNNANTGCAGTGCNNTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C T A G A C G T A C T G C G T A A G T C G T C A A C G T A G T C A C G T G C T A
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCAGTGDCATCTH
ADGGYAGYAGCATCT-
 A C G T A C G T A C G T A C T G A G T C C G T A C T A G A C G T A C T G C G T A A G T C G T C A A C G T A G T C A C G T G C T A
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GCAGTGDCATCTH
----TGTCANYT-
 A C T G A G T C C G T A C T A G A C G T A C T G C G T A A G T C G T C A A C G T A G T C A C G T G C T A
A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GCAGTGDCATCTH
----TGACCYCT-
 A C T G A G T C C G T A C T A G A C G T A C T G C G T A A G T C G T C A A C G T A G T C A C G T G C T A
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCAGTGDCATCTH
AGGTCANTGACCTN--
 A C G T A C G T A C G T A C T G A G T C C G T A C T A G A C G T A C T G C G T A A G T C G T C A A C G T A G T C A C G T G C T A
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GCAGTGDCATCTH
----TGACCTYA-
 A C T G A G T C C G T A C T A G A C G T A C T G C G T A A G T C G T C A A C G T A G T C A C G T G C T A
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCAGTGDCATCTH---
NNNNTTGACCCCTNNNN
 A C G T A C T G A G T C C G T A C T A G A C G T A C T G C G T A A G T C G T C A A C G T A G T C A C G T G C T A A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCAGTGDCATCTH
---GTGACCTT--
 A C T G A G T C C G T A C T A G A C G T A C T G C G T A A G T C G T C A A C G T A G T C A C G T G C T A
A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

JUN/MA0488.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCAGTGDCATCTH---
---ATGACATCATCNN
 A C T G A G T C C G T A C T A G A C G T A C T G C G T A A G T C G T C A A C G T A G T C A C G T G C T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T