Information for 12-CACACCCTGCAGG (Motif 13)

G T A C C G T A A G T C C G T A T A G C A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C G T A C C G A T A C T G A G T C C G T A A C T G A C T G A C T G A C G T A C T G A C G T A C T G
p-value:1e-9
log p-value:-2.221e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.6 +/- 15.9bp
Average Position of motif in Background49.2 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CACACCCTGCAGG
GGCCACACCCAN----
 A C G T A C G T A C G T G T A C C G T A A G T C C G T A T A G C A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C T G
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CACACCCTGCAGG
GGCCACACCCA-----
 A C G T A C G T A C G T G T A C C G T A A G T C C G T A T A G C A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C T G
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CACACCCTGCAGG
ACCACATCCTGT---
 A C G T A C G T G T A C C G T A A G T C C G T A T A G C A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C T G
T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CACACCCTGCAGG-
--CCCCCTGCTGTG
 G T A C C G T A A G T C C G T A T A G C A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C G T
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CACACCCTGCAGG-----
---DCHCAGCAGGRGGCC
 G T A C C G T A A G T C C G T A T A G C A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CACACCCTGCAGG---
-CCACACAGCAGGAGA
 G T A C C G T A A G T C C G T A T A G C A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CACACCCTGCAGG
GCCACACCCA-----
 A C G T A C G T G T A C C G T A A G T C C G T A T A G C A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C T G
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CACACCCTGCAGG
GCCMCRCCCH-----
 A C G T A C G T G T A C C G T A A G T C C G T A T A G C A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C T G
C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CACACCCTGCAGG---
-CCACACAGCAGGAGA
 G T A C C G T A A G T C C G T A T A G C A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CACACCCTGCAGG
---DCTCAGCAGG
 G T A C C G T A A G T C C G T A T A G C A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C T G
A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G