Information for 9-GAAGCCGCTT (Motif 12)

T A C G C G T A G C T A C A T G A G T C A T G C T A C G T A G C C G A T G A C T
Reverse Opposite:
C T G A G C T A A T C G A T G C T A C G T C A G G T A C C G A T G A C T A G T C
p-value:1e-9
log p-value:-2.279e+01
Information Content per bp:1.674
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.62%
Number of Background Sequences with motif432.1
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets40.3 +/- 25.7bp
Average Position of motif in Background52.7 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCCGCTT
NGAAGC-----
 A C G T T A C G C G T A G C T A C A T G A G T C A T G C T A C G T A G C C G A T G A C T
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

TFCP2/MA0145.3/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAAGCCGCTT-
-AAACCGGTTT
 T A C G C G T A G C T A C A T G A G T C A T G C T A C G T A G C C G A T G A C T A C G T
A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T

PH0126.1_Obox6/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GAAGCCGCTT--
CNATAATCCGNTTNT
 A C G T A C G T A C G T T A C G C G T A G C T A C A T G A G T C A T G C T A C G T A G C C G A T G A C T A C G T A C G T
T A G C C T G A G C T A C G A T C G T A C G T A A C G T G T A C A G T C A T C G G A C T C G A T G A C T C G A T C A G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAAGCCGCTT------
TAAGCCACTTAACATT
 T A C G C G T A G C T A C A T G A G T C A T G C T A C G T A G C C G A T G A C T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

GCM1/MA0646.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAAGCCGCTT-
GTACCCGCATN
 T A C G C G T A G C T A C A T G A G T C A T G C T A C G T A G C C G A T G A C T A C G T
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAAGCCGCTT----
TCGTACCCGCATCATT
 A C G T A C G T T A C G C G T A G C T A C A T G A G T C A T G C T A C G T A G C C G A T G A C T A C G T A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAAGCCGCTT------
TAAGCCACTTGAAATT
 T A C G C G T A G C T A C A T G A G T C A T G C T A C G T A G C C G A T G A C T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

Crx/MA0467.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCCGCTT
CTAATCCTCTT
 A C G T T A C G C G T A G C T A C A T G A G T C A T G C T A C G T A G C C G A T G A C T
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAAGCCGCTT------
TAAGCCACTTGAAATT
 T A C G C G T A G C T A C A T G A G T C A T G C T A C G T A G C C G A T G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

PH0114.1_Nkx2-5/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAAGCCGCTT------
TAAGCCACTTGAATTT
 T A C G C G T A G C T A C A T G A G T C A T G C T A C G T A G C C G A T G A C T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T