Information for 4-TCATGGGCACAAAAAT (Motif 11)

A C G T A G T C C G T A A C G T A C T G C T A G A C T G A G T C C G T A A G T C C G T A C T G A G T C A C G T A C G T A A G C T
Reverse Opposite:
C T G A C G A T C G A T C A G T A G C T A C G T A C T G A C G T A C T G A G T C G A T C A G T C C G T A C G A T A C T G C G T A
p-value:1e-10
log p-value:-2.470e+01
Information Content per bp:1.879
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.0 +/- 20.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TCATGGGCACAAAAAT
TACATGTGCACATAAAA
 A C G T A C G T A G T C C G T A A C G T A C T G C T A G A C T G A G T C C G T A A G T C C G T A C T G A G T C A C G T A C G T A A G C T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCATGGGCACAAAAAT
NNNNTTGGGCACNNCN--
 A C G T A C G T A C G T A G T C C G T A A C G T A C T G C T A G A C T G A G T C C G T A A G T C C G T A C T G A G T C A C G T A C G T A A G C T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCATGGGCACAAAAAT
CAGATGTGCACATACGT
 A C G T A C G T A G T C C G T A A C G T A C T G C T A G A C T G A G T C C G T A A G T C C G T A C T G A G T C A C G T A C G T A A G C T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCATGGGCACAAAAAT
-NGTGGGCAT------
 A C G T A G T C C G T A A C G T A C T G C T A G A C T G A G T C C G T A A G T C C G T A C T G A G T C A C G T A C G T A A G C T
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TCATGGGCACAAAAAT--
--CGAAGCACACAAAATA
 A C G T A G T C C G T A A C G T A C T G C T A G A C T G A G T C C G T A A G T C C G T A C T G A G T C A C G T A C G T A A G C T A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TCATGGGCACAAAAAT
GGGCCGTGTGCAAAAA---
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G C T A G A C T G A G T C C G T A A G T C C G T A C T G A G T C A C G T A C G T A A G C T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TCATGGGCACAAAAAT
-CAATTGCAAAAATAT
 A C G T A G T C C G T A A C G T A C T G C T A G A C T G A G T C C G T A A G T C C G T A C T G A G T C A C G T A C G T A A G C T
A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TCATGGGCACAAAAAT
-CSTGGGAAAD-----
 A C G T A G T C C G T A A C G T A C T G C T A G A C T G A G T C C G T A A G T C C G T A C T G A G T C A C G T A C G T A A G C T
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TCATGGGCACAAAAAT
---RGGGCACTAACY-
 A C G T A G T C C G T A A C G T A C T G C T A G A C T G A G T C C G T A A G T C C G T A C T G A G T C A C G T A C G T A A G C T
A C G T A C G T A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TCATGGGCACAAAAAT
AGGTCAAGGTCA-------
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G C T A G A C T G A G T C C G T A A G T C C G T A C T G A G T C A C G T A C G T A A G C T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T