Information for 7-BAHCATGGCGGCG (Motif 7)

A T C G T C G A G C T A T A G C G T C A A G C T A C T G A C T G A G T C A T C G T C A G A G T C A C T G
Reverse Opposite:
T G A C C T A G A G T C A T G C C T A G A G T C A G T C C T G A A C G T A T C G C G A T A G C T T A G C
p-value:1e-11
log p-value:-2.732e+01
Information Content per bp:1.750
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.26%
Number of Background Sequences with motif127.2
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets49.4 +/- 26.4bp
Average Position of motif in Background58.3 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.83
Offset:0
Orientation:forward strand
Alignment:BAHCATGGCGGCG
CAAGATGGCGGC-
 A T C G T C G A G C T A T A G C G T C A A G C T A C T G A C T G A G T C A T C G T C A G A G T C A C T G
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:BAHCATGGCGGCG
CAAGATGGCGGC-
 A T C G T C G A G C T A T A G C G T C A A G C T A C T G A C T G A G T C A T C G T C A G A G T C A C T G
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:BAHCATGGCGGCG
--TAATGGCGGNC
 A T C G T C G A G C T A T A G C G T C A A G C T A C T G A C T G A G T C A T C G T C A G A G T C A C T G
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:BAHCATGGCGGCG----
NNNNTTGGCGCCGANNN
 A T C G T C G A G C T A T A G C G T C A A G C T A C T G A C T G A G T C A T C G T C A G A G T C A C T G A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:BAHCATGGCGGCG----
NNNNTTGGCGCCGANNN
 A T C G T C G A G C T A T A G C G T C A A G C T A C T G A C T G A G T C A T C G T C A G A G T C A C T G A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:BAHCATGGCGGCG----
NAGANTGGCGGGGNGNA
 A T C G T C G A G C T A T A G C G T C A A G C T A C T G A C T G A G T C A T C G T C A G A G T C A C T G A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-BAHCATGGCGGCG
TTGCCATGGCAACN
 A C G T A T C G T C G A G C T A T A G C G T C A A G C T A C T G A C T G A G T C A T C G T C A G A G T C A C T G
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

Rfx1/MA0509.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--BAHCATGGCGGCG
GTTGCCATGGCAAC-
 A C G T A C G T A T C G T C G A G C T A T A G C G T C A A G C T A C T G A C T G A G T C A T C G T C A G A G T C A C T G
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:BAHCATGGCGGCG-----
-NNNAAGGGGGCGGGNNN
 A T C G T C G A G C T A T A G C G T C A A G C T A C T G A C T G A G T C A T C G T C A G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---BAHCATGGCGGCG
KGTTGCCATGGCAAC-
 A C G T A C G T A C G T A T C G T C G A G C T A T A G C G T C A A G C T A C T G A C T G A G T C A T C G T C A G A G T C A C T G
A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C A C G T